RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 V9GYH0 126 aa13.28□□□□□ -0.28
ABCA3-204ENST00000566200 MUC4Q99102 2169 aa13.27□□□□□ -0.28
ABCA3-204ENST00000566200 PIGBOS1A0A0B4J2F0 54 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 H3BP45 60 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 M0R2Z0 102 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 MED6O75586 246 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 SFT2D2O95562 160 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 FAUP35544 74 aaKnown RBP13.27□□□□□ -0.29
ABCA3-204ENST00000566200 SPINK13Q1W4C9 94 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 RNF182Q8N6D2 247 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 CIB3Q96Q77 187 aaPredicted RBP13.27□□□□□ -0.29
ABCA3-204ENST00000566200 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
ABCA3-204ENST00000566200 PLAC8L1A1L4L8 177 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 ZNF705GA8MUZ8 300 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-204ENST00000566200 HOXB5P09067 269 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 SPANXN5Q5MJ07 72 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 ACOT7LQ6ZUV0 252 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 ZNF575Q86XF7 245 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 OR1B1Q8NGR6 318 aa13.26□□□□□ -0.29
ABCA3-204ENST00000566200 H3BRN7 92 aa13.25□□□□□ -0.29
ABCA3-204ENST00000566200 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
ABCA3-204ENST00000566200 TMEM208Q9BTX3 173 aa13.25□□□□□ -0.29
ABCA3-204ENST00000566200 TMEM147Q9BVK8 224 aa13.25□□□□□ -0.29
ABCA3-204ENST00000566200 HSPG2P98160 4391 aa13.25□□□□□ -0.29
ABCA3-204ENST00000566200 INSP01308 110 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 AZU1P20160 251 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 RPP30P78346 268 aaKnown RBP13.24□□□□□ -0.29
ABCA3-204ENST00000566200 AKR1C1Q04828 323 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 PYDC2Q56P42 97 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 GPR82Q96P67 336 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 SLC25A21Q9BQT8 299 aaPredicted RBP13.24□□□□□ -0.29
ABCA3-204ENST00000566200 KRTAP4-5Q9BYR2 181 aa13.24□□□□□ -0.29
ABCA3-204ENST00000566200 PMS2P5A8MQ11 134 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 DUSP14O95147 198 aaKnown RBP13.23□□□□□ -0.29
ABCA3-204ENST00000566200 AP3S2P59780 193 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 C1orf134Q5TEV5 83 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 CYP2G1PQ6ZSU1 146 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 TMEM144Q7Z5S9 345 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
ABCA3-204ENST00000566200 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
ABCA3-204ENST00000566200 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
ABCA3-204ENST00000566200 TRAV12-2A0A075B6T6 113 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 LYRM9A8MSI8 78 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 ADAP1O75689 374 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 ID3Q02535 119 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 FCN2Q15485 313 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
ABCA3-204ENST00000566200 CCNKO75909 580 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 DEFB130BP0DP73 79 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 DEFB130AP0DP74 79 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 PRB4P10163 310 aaPredicted RBP13.21□□□□□ -0.29
ABCA3-204ENST00000566200 TSPOP30536 169 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 POLR2GP62487 172 aaKnown RBP eCLIP13.21□□□□□ -0.29
ABCA3-204ENST00000566200 FGL1Q08830 312 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 ZNF738Q8NE65 137 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 UHRF2Q96PU4 802 aa13.21□□□□□ -0.29
ABCA3-204ENST00000566200 BOLA2-SMG1P6H3BVE0 249 aa13.2□□□□□ -0.3
ABCA3-204ENST00000566200 IL5P05113 134 aa13.2□□□□□ -0.3
ABCA3-204ENST00000566200 FAM3BP58499 235 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-204ENST00000566200 PLP1P60201 277 aa13.2□□□□□ -0.3
ABCA3-204ENST00000566200 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
ABCA3-204ENST00000566200 HIGD1AQ9Y241 93 aa13.2□□□□□ -0.3
ABCA3-204ENST00000566200 A0A087X0K7 114 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 SMCO3A2RU48 225 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 NOL3O60936 208 aaKnown RBP13.19□□□□□ -0.3
ABCA3-204ENST00000566200 LINC00869P0C866 280 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 CXCL3P19876 107 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 B2MP61769 119 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 TNP2Q05952 138 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 CCDC190Q86UF4 302 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 OR8A1Q8NGG7 326 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
ABCA3-204ENST00000566200 LRP1BQ9NZR2 4599 aa13.18□□□□□ -0.3
ABCA3-204ENST00000566200 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
ABCA3-204ENST00000566200 HYPMO75409 117 aa13.18□□□□□ -0.3
ABCA3-204ENST00000566200 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
ABCA3-204ENST00000566200 RAP2BP61225 183 aa13.18□□□□□ -0.3
ABCA3-204ENST00000566200 HIST1H1AQ02539 215 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-204ENST00000566200 PSENENQ9NZ42 101 aa13.18□□□□□ -0.3
ABCA3-204ENST00000566200 F5H768 121 aa13.17□□□□□ -0.3
ABCA3-204ENST00000566200 OR5G3P0C626 314 aa13.17□□□□□ -0.3
ABCA3-204ENST00000566200 S100A7P31151 101 aa13.17□□□□□ -0.3
ABCA3-204ENST00000566200 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
ABCA3-204ENST00000566200 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
ABCA3-204ENST00000566200 NBDYA0A0U1RRE5 68 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 SSSCA1O60232 199 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 RRAS2P62070 204 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-204ENST00000566200 RHOBP62745 196 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 PSG3Q16557 428 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 TMEM14EPQ6UXP3 125 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 LINC01587Q99440 93 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
ABCA3-204ENST00000566200 K7EPK0 472 aa13.15□□□□□ -0.3
ABCA3-204ENST00000566200 NUDT3O95989 172 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms