RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 A6NJ64 397 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 ZFP92A6NM28 416 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 SCAND1P57086 179 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 KLF9Q13886 244 aaPredicted RBP10.93□□□□□ -0.66
CLK3-217ENST00000566126 PSG3Q16557 428 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 PACRGLQ8N7B6 248 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 OR52E5Q8NH55 327 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 SCN3BQ9NY72 215 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 LPAP08519 4548 aa10.93□□□□□ -0.66
CLK3-217ENST00000566126 MUC2Q02817 5179 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 PRAF2O60831 178 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 NAT1P18440 290 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 CRYBA4P53673 196 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 TAS2R46P59540 309 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 OR2F1Q13607 317 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 LELP1Q5T871 98 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 SPARTQ8N0X7 666 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 PARD6GQ9BYG4 376 aaPredicted RBP10.92□□□□□ -0.66
CLK3-217ENST00000566126 DUSP21Q9H596 190 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 Q9HAA7 133 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 DIABLOQ9NR28 239 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 NDUFB11Q9NX14 153 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 FUT9Q9Y231 359 aa10.92□□□□□ -0.66
CLK3-217ENST00000566126 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.91□□□□□ -0.66
CLK3-217ENST00000566126 SNRPGP15A8MWD9 76 aa10.91□□□□□ -0.66
CLK3-217ENST00000566126 HRH1P35367 487 aa10.91□□□□□ -0.66
CLK3-217ENST00000566126 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
CLK3-217ENST00000566126 LYSMD2Q8IV50 215 aa10.91□□□□□ -0.66
CLK3-217ENST00000566126 IBA57-AS1B1ANH7 110 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 RGS10O43665 173 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 UCP3P55916 312 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 FGL1Q08830 312 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 ASAH1Q13510 395 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 ODF1Q14990 250 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 NMSQ5H8A3 153 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.66
CLK3-217ENST00000566126 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 ATG12O94817 140 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
CLK3-217ENST00000566126 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 OR4D5Q8NGN0 318 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 C8orf4Q9NR00 106 aa10.89□□□□□ -0.67
CLK3-217ENST00000566126 K7EQD1 137 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 IGLV2-11P01706 119 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 CXCL3P19876 107 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 HLA-DMAP28067 261 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 RND3P61587 244 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 ST6GAL2Q96JF0 529 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 GSN-AS1Q9NRJ2 163 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
CLK3-217ENST00000566126 CEBPZOSA8MTT3 80 aa10.87□□□□□ -0.67
CLK3-217ENST00000566126 LECT2O14960 151 aa10.87□□□□□ -0.67
CLK3-217ENST00000566126 PI3P19957 117 aa10.87□□□□□ -0.67
CLK3-217ENST00000566126 TSPAN5P62079 268 aa10.87□□□□□ -0.67
CLK3-217ENST00000566126 Q6ZRU5 148 aa10.87□□□□□ -0.67
CLK3-217ENST00000566126 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
CLK3-217ENST00000566126 C3orf85A0A1B0GTC6 90 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 FABP1P07148 127 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 SRIP30626 198 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 FHL2Q14192 279 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 SP6Q3SY56 376 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 PRSS48Q7RTY5 328 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 NOXA1Q86UR1 476 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 RBPMSQ93062 196 aaKnown RBP10.86□□□□□ -0.67
CLK3-217ENST00000566126 GPR82Q96P67 336 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 TXNL4BQ9NX01 149 aaKnown RBP10.86□□□□□ -0.67
CLK3-217ENST00000566126 SLC45A2Q9UMX9 530 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 TPRKBQ9Y3C4 175 aa10.86□□□□□ -0.67
CLK3-217ENST00000566126 IGKV1OR2-108A0A075B7D4 117 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 IGHV3-38A0A0C4DH36 116 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 SPINK4O60575 86 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 CCNKO75909 580 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 GYPEP15421 78 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 GATA2P23769 480 aaPredicted RBP10.85□□□□□ -0.67
CLK3-217ENST00000566126 PIGPP57054 158 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 SLAQ13239 276 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
CLK3-217ENST00000566126 TRGV9Q99603 122 aa10.85□□□□□ -0.67
CLK3-217ENST00000566126 E5RGE8 158 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 CLEC2LP0C7M8 214 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 PGAM2P15259 253 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 LINC01556Q5JQF7 62 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
CLK3-217ENST00000566126 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 CACNG5Q9UF02 275 aa10.84□□□□□ -0.67
CLK3-217ENST00000566126 TRAV12-3A0A0B4J271 114 aa10.83□□□□□ -0.68
CLK3-217ENST00000566126 FAM219AQ8IW50 185 aa10.83□□□□□ -0.68
CLK3-217ENST00000566126 SLC35E1Q96K37 410 aa10.83□□□□□ -0.68
CLK3-217ENST00000566126 MRPL32Q9BYC8 188 aaKnown RBP10.83□□□□□ -0.68
CLK3-217ENST00000566126 KLF12Q9Y4X4 402 aa10.83□□□□□ -0.68
CLK3-217ENST00000566126 GABARAPH6UMI1 98 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 J3KRW8 73 aa10.82□□□□□ -0.68
CLK3-217ENST00000566126 GABARAPO95166 117 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms