RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 Q5PR19 223 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 C5orf24Q7Z6I8 188 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 BPESC1Q9GZL8 116 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 RNF114Q9Y508 228 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 A0A087WWL8 130 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 CACNA1EQ15878 2313 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 PRTN3P24158 256 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 CHD5Q8TDI0 1954 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 FGF16O43320 207 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
CX3CL1-204ENST00000565912 ANKRD36A6QL64 1941 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 IGKV1-5P01602 117 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 SEC11AP67812 179 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 PSG3Q16557 428 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 SIGLEC9Q9Y336 463 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 SBF1O95248 1867 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 FAM223BA6NKX1 122 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 SLC25A16P16260 332 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 FAM223AQ8IWN6 122 aa11.1□□□□□ -0.63
CX3CL1-204ENST00000565912 OVOL3O00110 214 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 RNF223E7ERA6 249 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 SS18Q15532 418 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 BCL6BQ8N143 479 aaPredicted RBP11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 ANAPC10Q9UM13 185 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 CXCL1P09341 107 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 SAA4P35542 130 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 BMPERQ8N8U9 685 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC00473A8K010 186 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC00205P59089 165 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 SIGMAR1Q99720 223 aa11.09□□□□□ -0.63
CX3CL1-204ENST00000565912 CEP250Q9BV73 2442 aa11.08□□□□□ -0.63
CX3CL1-204ENST00000565912 C5orf63A6NC05 138 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 DEFB131AP59861 70 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 LINC01559Q495D7 138 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 THSD7BQ9C0I4 1608 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 LEPROTO15243 131 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 NTF4P34130 210 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 RPP25LQ8N5L8 163 aaKnown RBP11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 NUP35Q8NFH5 326 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 SPXQ9BT56 116 aa11.08□□□□□ -0.64
CX3CL1-204ENST00000565912 SDK2Q58EX2 2172 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 PRIMA1Q86XR5 153 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MAPK1IP1LQ8NDC0 245 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 RFNGQ9Y644 331 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 IGKV1D-17A0A075B6S4 117 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 GLRX5Q86SX6 157 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 LHFPL1Q86WI0 220 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 VWC2LB2RUY7 222 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MBD3L3A6NE82 208 aaPredicted RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MBD3L2Q8NHZ7 208 aaPredicted RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 C2orf82Q6UX34 121 aa11.07□□□□□ -0.64
CX3CL1-204ENST00000565912 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 CFHR3Q02985 330 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 A6NNC1 897 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 NMSQ5H8A3 153 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TMEM14EPQ6UXP3 125 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 RPRMLQ8N4K4 120 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 KNCNA6PVL3 124 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 MLANAQ16655 118 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
CX3CL1-204ENST00000565912 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 Q6P435 159 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 KLHDC3Q9BQ90 382 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 XCL2Q9UBD3 114 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 TNFSF13O75888 250 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 LIME1Q9H400 295 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 RLFQ13129 1914 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 F5H768 121 aa11.05□□□□□ -0.64
CX3CL1-204ENST00000565912 AMBPP02760 352 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms