RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 LINC00305Q7Z4B0 112 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 BPIFA4PQ86YQ2 179 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 DOK5Q9P104 306 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 UBQLN2Q9UHD9 624 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
SHCBP1-204ENST00000565887 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 ATF4P18848 351 aaPredicted RBP9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 PSMB3P49720 205 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 DEFB131AP59861 70 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 HAGHQ16775 308 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 TMEM37Q8WXS4 190 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 MAP6D1Q9H9H5 199 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 CLEC5AQ9NY25 188 aa9.35□□□□□ -0.91
SHCBP1-204ENST00000565887 TGP01266 2768 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 TAAR5O14804 337 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 GUK1Q16774 197 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 STHQ8IWL8 128 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 SLC25A32Q9H2D1 315 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
SHCBP1-204ENST00000565887 FXYD6-FXYD2A0A087WZ82 144 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 A0A087X0K7 114 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 BORCS7-ASMTA0A0B4J1R7 106 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 CXCL2P19875 107 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 TMEM41BQ5BJD5 291 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 Q5BKY6 102 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 Q6ZNX1 250 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 APRG1Q8IVJ8 170 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 LRRC20Q8TCA0 184 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 UHRF2Q96PU4 802 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 ASCL2Q99929 193 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 WFDC10AQ9H1F0 79 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 TIMM9Q9Y5J7 89 aa9.33□□□□□ -0.92
SHCBP1-204ENST00000565887 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 MORN3Q6PF18 240 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 Q6ZWC4 215 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 LINC00052Q96N35 136 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 CITED4Q96RK1 184 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 RPRMQ9NS64 109 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 U3KQK5 164 aa9.32□□□□□ -0.92
SHCBP1-204ENST00000565887 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 SOCS3O14543 225 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 JTBO76095 146 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 MBP02144 154 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 SPP1P10451 314 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 SERF2P84101 59 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 ACOT6Q3I5F7 207 aaPredicted RBP9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 LCN15Q6UWW0 184 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 FAM24BQ8N5W8 94 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 GNPNAT1Q96EK6 184 aaPredicted RBP9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 HRH4Q9H3N8 390 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 TMEM14CQ9P0S9 112 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
SHCBP1-204ENST00000565887 PRKDCP78527 4128 aaKnown RBP9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 A0A0D9SG52 128 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 TAS2R45P59539 299 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 RHOBP62745 196 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 FFAR4Q5NUL3 377 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 MFFQ9GZY8 342 aa9.3□□□□□ -0.92
SHCBP1-204ENST00000565887 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 ZNF253O75346 499 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 M6PRP20645 277 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 ZNF345Q14585 488 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 FUT9Q9Y231 359 aa9.29□□□□□ -0.92
SHCBP1-204ENST00000565887 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 H3BMM0 161 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 ARPC5O15511 151 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
SHCBP1-204ENST00000565887 PSG9Q00887 426 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms