RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 SUN5Q8TC36 379 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 RNF125Q96EQ8 232 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 PFDN5Q99471 154 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
CHD9-217ENST00000565832 SELENOKQ9Y6D0 94 aa4.82□□□□□ -1.64
CHD9-217ENST00000565832 TENM1Q9UKZ4 2725 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 IGHV3-66A0A0C4DH42 116 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ZNF207O43670 478 aaKnown RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 TRGV3P03979 118 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 IGF1P05019 195 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 TAS2R45P59539 299 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 BPIFB3P59826 476 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 GNG5P63218 68 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 KRTAP1-1Q07627 177 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ADIRFQ15847 76 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 TMEM241Q24JQ0 296 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 Q6YL49 198 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ZNF600Q6ZNG1 722 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 NECAP1Q8NC96 275 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ZNF502Q8TBZ5 544 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 OR5B12Q96R08 314 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 GNB4Q9HAV0 340 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 HIGD1AQ9Y241 93 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 WI2-2373I1.2A0A1W2PRP0 233 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 COLCA2A8K830 154 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 TOMM40O96008 361 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 APOHP02749 345 aaPredicted RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 NBEAP1P0C6P0 100 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 RPL35P42766 123 aaKnown RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 TPPP2P59282 170 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 PLP1P60201 277 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 EXOC3-AS1Q8N2X6 119 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 SIGLECL1Q8N7X8 197 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 OCC1Q8TAD7 63 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 Q8WTZ3 238 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ASCL2Q99929 193 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 MRPL32Q9BYC8 188 aaKnown RBP4.81□□□□□ -1.64
CHD9-217ENST00000565832 TMEM167BQ9NRX6 74 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 ZNF586Q9NXT0 402 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 PITPNC1Q9UKF7 332 aa4.81□□□□□ -1.64
CHD9-217ENST00000565832 PGPA6NDG6 321 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 ZNF98A6NK75 572 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 PDE6DO43924 150 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 OR2C1O95371 312 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 GP9P14770 177 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 YPEL3P61236 119 aaPredicted RBP4.8□□□□□ -1.64
CHD9-217ENST00000565832 ATP5G2Q06055 141 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 RNF212Q495C1 297 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 TOMM20LQ6UXN7 152 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 Q71RC1 249 aaPredicted RBP4.8□□□□□ -1.64
CHD9-217ENST00000565832 NHLRC2Q8NBF2 726 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 RPH3ALQ9UNE2 315 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 VWFP04275 2813 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 K7EN84 100 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 SLC17A3O00476 420 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 OR5I1Q13606 314 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 LINC01551Q86U37 167 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 VN1R17PQ8TDU5 208 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 SHANK2-AS3Q9BTD1 123 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 SMCO4Q9NRQ5 59 aa4.8□□□□□ -1.64
CHD9-217ENST00000565832 BAHCC1Q9P281 2608 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 TRAV30A0A087WSZ9 112 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 TGIF2-C20orf24A0A0A6YYL0 155 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 A0A1W2PRE2 83 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 CLPSL1A2RUU4 121 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 HELTA6NFD8 242 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 AP4M1O00189 453 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 CXCL1P09341 107 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 HIST1H1BP16401 226 aaKnown RBP4.79□□□□□ -1.64
CHD9-217ENST00000565832 MYCNOSP40205 109 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 RAB9AP51151 201 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 RHEBQ15382 184 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 UNQ9165/PRO28630Q6UXU0 137 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 C9orf139Q6ZV77 190 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 EEF1AKMT3Q96AZ1 226 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 TMEM68Q96MH6 324 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 RNF2Q99496 336 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 FOXC2Q99958 501 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 SPATA25Q9BR10 227 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 VPREB3Q9UKI3 123 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 SMAD5-AS1Q9Y6J3 95 aa4.79□□□□□ -1.64
CHD9-217ENST00000565832 TRAV8-1A0A0A6YYK1 113 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 H3BRN7 92 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 M0QZK8 103 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 ISLRO14498 428 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 TGOLN2O43493 480 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 CRYBA1P05813 215 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 EDN2P20800 178 aa4.78□□□□□ -1.64
CHD9-217ENST00000565832 CRIP2P52943 208 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms