RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 IQCF6A8MYZ5 107 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 H3BP45 60 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TNFSF12O43508 249 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 SYNGR1O43759 233 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 OR2H2O95918 312 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1D-33P01593 117 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1-33P01594 117 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 STAG3L2P0CL84 134 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 STAG3L3P0CL85 134 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 PPOXP50336 477 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 DMRTC1Q5HYR2 192 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 LEMD1Q68G75 181 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.22□□□□□ -1.89
LINC00561-201ENST00000565815 MAPK1IP1LQ8NDC0 245 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 C8orf46Q8TAG6 207 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 RNF2Q99496 336 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 CHRDL1Q9BU40 450 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 RAB1BQ9H0U4 201 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 SLC25A22Q9H936 323 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM167BQ9NRX6 74 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 IL19Q9UHD0 177 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 DYSFO75923 2080 aa3.22□□□□□ -1.89
LINC00561-201ENST00000565815 ODAMA1E959 279 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 HPRT1P00492 218 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OR5G3P0C626 314 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 PRDX2P32119 198 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 RHOBP62745 196 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 SRYQ05066 204 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 COL5A1-AS1Q5SY13 56 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 FAM78BQ5VT40 261 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OR8G2PQ6IF36 304 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 C19orf35Q6ZS72 473 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 BHLHA15Q7RTS1 189 aaPredicted RBP3.21□□□□□ -1.89
LINC00561-201ENST00000565815 GCNT2Q8N0V5 402 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 BATF2Q8N1L9 274 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 C17orf78Q8N4C9 275 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OR4F17Q8NGA8 305 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OR1K1Q8NGR3 316 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM37Q8WXS4 190 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 RDH5Q92781 318 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 SLC35E1Q96K37 410 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.89
LINC00561-201ENST00000565815 SNHG12Q9BXW3 62 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF586Q9NXT0 402 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 OR1A1Q9P1Q5 309 aa3.21□□□□□ -1.89
LINC00561-201ENST00000565815 DNHD1Q96M86 4753 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 DNAJC13O75165 2243 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 FLNAP21333 2647 aaKnown RBP3.21□□□□□ -1.9
LINC00561-201ENST00000565815 DLEU1O43261 78 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 YPEL1O60688 119 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 HAND1O96004 215 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 CRISP2P16562 243 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 ERVK-16P61578 105 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 RPEL1Q2QD12 228 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 Q8N377 158 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 MUC15Q8N387 334 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 OR5AU1Q8NGC0 362 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 OR2D3Q8NGH3 330 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 OR5B3Q8NH48 314 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 IL1F10Q8WWZ1 152 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 ADTRPQ96IZ2 230 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 RBM14Q96PK6 669 aaKnown RBP3.21□□□□□ -1.9
LINC00561-201ENST00000565815 YPEL2Q96QA6 119 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 VAMP8Q9BV40 100 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 OSTCQ9NRP0 149 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 JPT1Q9UK76 154 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF407Q9C0G0 2248 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 ARID1AO14497 2285 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 HLA-DQA1P01909 254 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 CD55P08174 381 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 BRS3P32247 399 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 RPL29P47914 159 aaKnown RBP3.21□□□□□ -1.9
LINC00561-201ENST00000565815 RAB7AP51149 207 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 PMCHL1Q16048 86 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 NECAP1Q8NC96 275 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 ABHD3Q8WU67 409 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 SMIM12Q96EX1 92 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 TBX15Q96SF7 602 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 OR2D2Q9H210 308 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 NPVFQ9HCQ7 196 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 MRPL27Q9P0M9 148 aaKnown RBP3.21□□□□□ -1.9
LINC00561-201ENST00000565815 GOLT1BQ9Y3E0 138 aa3.21□□□□□ -1.9
LINC00561-201ENST00000565815 USF3Q68DE3 2245 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 BOD1L1Q8NFC6 3051 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ALPK2Q86TB3 2170 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 TRAV39A0A0B4J263 110 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 DPRXA6NFQ7 191 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF705FA8MVS1 300 aaPredicted RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 H7C423 109 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF705DP0CH99 300 aaPredicted RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF705BP0CI00 300 aaPredicted RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 TAS2R45P59539 299 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 MRPS11P82912 194 aaKnown RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF90Q03938 601 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 BSPH1Q075Z2 132 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms