RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 FAM103A1Q9BTL3 118 aaKnown RBP7.47□□□□□ -1.21
CNEP1R1-206ENST00000565556 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
CNEP1R1-206ENST00000565556 PLEKHA3Q9HB20 300 aa7.47□□□□□ -1.21
CNEP1R1-206ENST00000565556 NDUFA4L2Q9NRX3 87 aa7.47□□□□□ -1.21
CNEP1R1-206ENST00000565556 CREBBPQ92793 2442 aa7.46□□□□□ -1.21
CNEP1R1-206ENST00000565556 TNCP24821 2201 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 SMIM27A0A1W2PRY6 76 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 INS-IGF2F8WCM5 200 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 OR7C2O60412 319 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 FSHBP01225 129 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 CD24P25063 80 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 C5orf64Q2M2E5 130 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 KLHDC1Q8N7A1 406 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 HINT2Q9BX68 163 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 MRPL32Q9BYC8 188 aaKnown RBP7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 CBY1Q9Y3M2 126 aa7.46□□□□□ -1.22
CNEP1R1-206ENST00000565556 ABCA1O95477 2261 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 A0A1W2PRE2 83 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 A0A1W2PS18 150 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 IZUMO1RA6ND01 250 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 GGTLC3B5MD39 225 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 BMPR1BO00238 502 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 CD5LO43866 347 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 APCSP02743 223 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 FRMD6-AS1P0C7T7 363 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 SRIP30626 198 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 RPL27AP46776 148 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 HNRNPA3P51991 378 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 ERHP84090 104 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 TNXAQ16473 311 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 MRGPRG-AS1Q2M3A8 158 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 FAM120AOSQ5T036 256 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 IBA57Q5T440 356 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGF2BP2-AS1Q96M15 143 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 MRPL27Q9P0M9 148 aaKnown RBP7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 CDC42EP3Q9UKI2 254 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 RNF114Q9Y508 228 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 ITPR3Q14573 2671 aa7.45□□□□□ -1.22
CNEP1R1-206ENST00000565556 CSMD2Q7Z408 3487 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 CCDC168Q8NDH2 2452 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 CNIH1O95406 144 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 C8orf88P0DMB2 117 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 MGST1P10620 155 aaKnown RBP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 MYOD1P15172 320 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 TCL1AP56279 114 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 FXYD3Q14802 87 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 C2orf83Q53S99 150 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 WIPF2Q8TF74 440 aaPredicted RBP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 ZNF503Q96F45 646 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 RCHY1Q96PM5 261 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 TXN2Q99757 166 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 RASL11BQ9BPW5 248 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 SRSF8Q9BRL6 282 aaKnown RBP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 ZNF331Q9NQX6 463 aaPredicted RBP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 SPINK4O60575 86 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 HYPMO75409 117 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGLV2-8P01709 118 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGLC2P0DOY2 106 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 SUB1P53999 127 aaKnown RBP eCLIP7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 PMCHL1Q16048 86 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 ZNF562Q6V9R5 426 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 Q6ZN92 141 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 Q8N9W7 124 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 PIFOQ8TCI5 191 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 SERTAD4Q9NUC0 356 aa7.44□□□□□ -1.22
CNEP1R1-206ENST00000565556 C20orf202A1L168 122 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 H3BUX3 64 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 UBE2L3P68036 154 aaKnown RBP7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 KIAA1644Q3SXP7 199 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 NIT1Q86X76 327 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 OR10W1Q8NGF6 305 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 TSKUQ8WUA8 353 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 SLC25A33Q9BSK2 321 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 MOB4Q9Y3A3 225 aa7.43□□□□□ -1.22
CNEP1R1-206ENST00000565556 A6NDX4 124 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 CGB1A6NKQ9 187 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 E7EUB6 86 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 HLA-DRB1P01911 266 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 SLC35B1P78383 322 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 DEFB112Q30KQ8 113 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 CACNG8Q8WXS5 425 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
CNEP1R1-206ENST00000565556 CSPG4Q6UVK1 2322 aa7.41□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGKV1OR2-108A0A075B7D4 117 aa7.41□□□□□ -1.22
CNEP1R1-206ENST00000565556 IGLC7A0M8Q6 106 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms