RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
CDH3-204ENST00000565453 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 AMTNQ6UX39 209 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 ZBTB8BQ8NAP8 495 aaPredicted RBP11.21□□□□□ -0.61
CDH3-204ENST00000565453 MITD1Q8WV92 249 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 GPR82Q96P67 336 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
CDH3-204ENST00000565453 DOK5Q9P104 306 aa11.21□□□□□ -0.61
CDH3-204ENST00000565453 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
CDH3-204ENST00000565453 SMCO3A2RU48 225 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 IL5P05113 134 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 CNPY1Q3B7I2 92 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
CDH3-204ENST00000565453 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 K7EPK0 472 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 TSC22D2O75157 780 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 METTL15P1P0C7V9 234 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 S100A7P31151 101 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 TAS2R30P59541 319 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
CDH3-204ENST00000565453 SELENOTP62341 195 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 C20orf85Q9H1P6 137 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 NPVFQ9HCQ7 196 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 HIGD1AQ9Y241 93 aa11.19□□□□□ -0.62
CDH3-204ENST00000565453 HYPMO75409 117 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 SCGB1D2O95969 90 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 MBPP02686 304 aaPredicted RBP11.18□□□□□ -0.62
CDH3-204ENST00000565453 LINC00869P0C866 280 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 SPART-AS1P0CW21 52 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 ARL16Q0P5N6 197 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 GOLT1BQ9Y3E0 138 aa11.18□□□□□ -0.62
CDH3-204ENST00000565453 LYRM1O43325 122 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 RPL7P18124 248 aaKnown RBP11.17□□□□□ -0.62
CDH3-204ENST00000565453 EMP1P54849 157 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 RAP2BP61225 183 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 UHRF2Q96PU4 802 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 GSKIPQ9P0R6 139 aa11.17□□□□□ -0.62
CDH3-204ENST00000565453 A0A087X0K7 114 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 C7orf66A4D0T2 115 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 CCSO14618 274 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
CDH3-204ENST00000565453 CRXO43186 299 aaPredicted RBP11.16□□□□□ -0.62
CDH3-204ENST00000565453 CNN1P51911 297 aaKnown RBP11.16□□□□□ -0.62
CDH3-204ENST00000565453 SLC38A11Q08AI6 406 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 TEPPQ6URK8 271 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
CDH3-204ENST00000565453 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
CDH3-204ENST00000565453 HBE1P02100 147 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 TCRBP04435 133 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 OR5G3P0C626 314 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 FGL1Q08830 312 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 GGACTQ9BVM4 153 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 ARL6Q9H0F7 186 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 ARV1Q9H2C2 271 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 C11orf1Q9H5F2 150 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
CDH3-204ENST00000565453 CXCL3P19876 107 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 OXA1LQ15070 435 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 ZNF431Q8TF32 576 aaPredicted RBP11.14□□□□□ -0.63
CDH3-204ENST00000565453 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
CDH3-204ENST00000565453 YTHDF2Q9Y5A9 579 aaKnown RBP11.14□□□□□ -0.63
CDH3-204ENST00000565453 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 M0R2Z0 102 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 AGPAT2O15120 278 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 ZNF546Q86UE3 836 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 MGST2Q99735 147 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 SEC22CQ9BRL7 303 aa11.13□□□□□ -0.63
CDH3-204ENST00000565453 INSP01308 110 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 P0DMU3 169 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 PSG3Q16557 428 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 S100A7AQ86SG5 101 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 POM121L12Q8N7R1 296 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 CCDC32Q9BV29 185 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 NUDT15Q9NV35 164 aa11.12□□□□□ -0.63
CDH3-204ENST00000565453 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
CDH3-204ENST00000565453 GOSR2O14653 212 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms