RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TMEM170AQ8WVE7 144 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 PPP1R1CQ8WVI7 109 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 SLC35E1Q96K37 410 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 C11orf1Q9H5F2 150 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 FNDC4Q9H6D8 234 aaPredicted RBP6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 NPVFQ9HCQ7 196 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 LYRM2Q9NU23 88 aaPredicted RBP6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 MDFICQ9P1T7 246 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 FAT1Q14517 4588 aa6.42□□□□□ -1.38
VPS9D1-205ENST00000565452 PMS2P5A8MQ11 134 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 PRSS46E5RG02 174 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 CFDP00746 253 aaPredicted RBP6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 CXCL3P19876 107 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 BCAP31P51572 246 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 S100A10P60903 97 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 YPEL3P61236 119 aaPredicted RBP6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 RPL11P62913 178 aaKnown RBP6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 HBG1P69891 147 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 HBG2P69892 147 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 DLK1P80370 383 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 GAMTQ14353 236 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 FCN2Q15485 313 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 MLANAQ16655 118 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 ZNF600Q6ZNG1 722 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 Q6ZNX1 250 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 TCF24Q7RTU0 167 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 TMEM144Q7Z5S9 345 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 TRPT1Q86TN4 253 aaKnown RBP6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 STX12Q86Y82 276 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 C15orf53Q8NAA6 179 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 UBAC2Q8NBM4 344 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 THAP6Q8TBB0 222 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 CLEC5AQ9NY25 188 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 PAIP2BQ9ULR5 123 aaKnown RBP6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
VPS9D1-205ENST00000565452 IGHV3-21A0A0B4J1V1 117 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 TEX48A0A1B0GUV7 120 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 YIF1AO95070 293 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 HTN3P15516 51 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 OR10J1P30954 320 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 S100A7P31151 101 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 SULT1A1P50225 295 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 CAV2P51636 162 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 EMP1P54849 157 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 NUTF2P61970 127 aaKnown RBP6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 BAXQ07812 192 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 THAP8Q8NA92 274 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 ZNRF2Q8NHG8 242 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 Q8WTZ3 238 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 NPIPB3Q92617 1050 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 TRGV9Q99603 122 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 GINS3Q9BRX5 216 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 NIPSNAP3BQ9BS92 247 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 C1QTNF4Q9BXJ3 329 aa6.4□□□□□ -1.38
VPS9D1-205ENST00000565452 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 H3BP45 60 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 METTL15P1P0C7V9 234 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 NUP62P37198 522 aaPredicted RBP6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 RND2P52198 227 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 CCL18P55774 89 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 SELENOTP62341 195 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 RAB31Q13636 194 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 LRRC37A5PQ49AS3 106 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 OR8G2PQ6IF36 304 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 TMEM88Q6PEY1 159 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 S100A7AQ86SG5 101 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 C17orf77Q96MU5 243 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
VPS9D1-205ENST00000565452 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 A0A1W2PS18 150 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 FAM24AA6NFZ4 105 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 SMIM9A6NGZ8 99 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 ZFP92A6NM28 416 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 H0YIZ8 118 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 MPDU1O75352 247 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 TOMM40O96008 361 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 IGHV3-48P01763 117 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 IGLC1P0CG04 106 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 RD3LP0DJH9 198 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 C4BPBP20851 252 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 SLC38A11Q08AI6 406 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 Q6ZSN1 163 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 OR51G1Q8NGK1 321 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 ZNF414Q96IQ9 312 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 NEU1Q99519 415 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 OR5AC2Q9NZP5 309 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 RABAC1Q9UI14 185 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 PLA2G2DQ9UNK4 145 aa6.38□□□□□ -1.39
VPS9D1-205ENST00000565452 RNF24Q9Y225 148 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms