RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OR10K2Q6IF99 312 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 LRRN1Q6UXK5 716 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 ZNF550Q7Z398 422 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 CNEP1R1Q8N9A8 125 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 OR51D1Q8NGF3 324 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 OR4X2Q8NGF9 303 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 OR13C8Q8NGS7 320 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 OR2T27Q8NH04 317 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 HAVCR2Q8TDQ0 301 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 ARL5BQ96KC2 179 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 MRPS26Q9BYN8 205 aaKnown RBP1.14□□□□□ -2.23
PALB2-203ENST00000565038 HES4Q9HCC6 221 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 FKBP14Q9NWM8 211 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 MED11Q9P086 117 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 TIMM22Q9Y584 194 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 DOCK10Q96BY6 2186 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 MPDZO75970 2070 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 KIAA1549Q9HCM3 1950 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 FLNAP21333 2647 aaKnown RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 STARD9Q9P2P6 4700 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 TRGV5A0A0B4J1U4 118 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 MUC21A0A0G2JKD1 596 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 A0A0G2JQZ4 141 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 A0A0J9YW62 118 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 MUC21A0A140T8X8 626 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 DPRXA6NFQ7 191 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 H3BPC8 53 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 PSMD12O00232 456 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 FADS1O60427 444 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 MT-CO2P00403 227 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 SHBGP04278 402 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 C8GP07360 202 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 BPGMP07738 259 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 SERPINA6P08185 405 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 OGNP20774 298 aaKnown RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 HIST1H1TP22492 207 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 GABRA2P47869 451 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 REG1BP48304 166 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 SARNPP82979 210 aaKnown RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 DR1Q01658 176 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 UAP1Q16222 522 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 COQ5Q5HYK3 327 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 C4orf22Q6V702 233 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 SPATA12Q7Z6I5 190 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 GID4Q8IVV7 300 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 CTAGE3PQ8IX95 158 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 LRRC25Q8N386 305 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 MORN4Q8NDC4 146 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 OR52R1Q8NGF1 315 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 RAB8BQ92930 207 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 MRPS24Q96EL2 167 aaKnown RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 SFRP2Q96HF1 295 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 AIF1LQ9BQI0 150 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 PECRQ9BY49 303 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 TTTY13Q9BZ97 58 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 NKX6-2Q9C056 277 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 HRASLSQ9HDD0 168 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 C14orf105Q9NVL8 296 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 TAAR3PQ9P1P4 343 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 NOSIPQ9Y314 301 aaKnown RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 SOX21Q9Y651 276 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 CHCHD2Q9Y6H1 151 aaPredicted RBP1.13□□□□□ -2.23
PALB2-203ENST00000565038 CACNA1CQ13936 2221 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 DNAH5Q8TE73 4624 aa1.13□□□□□ -2.23
PALB2-203ENST00000565038 VPS13DQ5THJ4 4388 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DSCAML1Q8TD84 2053 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 MXRA5Q9NR99 2828 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 RTTNQ86VV8 2226 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 SNRNP200O75643 2136 aaKnown RBP1.12□□□□□ -2.23
PALB2-203ENST00000565038 IGHV3-15A0A0B4J1V0 119 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 TMEM269A0A1B0GVZ9 245 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 OR6C6A6NF89 314 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 RFPL4AA6NLU0 287 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 CLDN24A6NM45 220 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 A8MT66 165 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DEFB108AA8MXU0 73 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 EVPLLA8MZ36 301 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 RFPL4AL1F8VTS6 287 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 LYNX1G3V0Z9 82 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 J3QQQ9 107 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 PGRMC1O00264 195 aaKnown RBP1.12□□□□□ -2.23
PALB2-203ENST00000565038 COX7A2LO14548 114 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 GNRH2O43555 120 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 LINC00032P0C843 101 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 LYNX1P0DP58 116 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DDTP30046 118 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 SSR2P43308 183 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 RPL27AP46776 148 aaKnown RBP1.12□□□□□ -2.23
PALB2-203ENST00000565038 STX5Q13190 355 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 DEFB113Q30KQ7 82 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 CLVS2Q5SYC1 327 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 FAM78BQ5VT40 261 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 C8orf74Q6P047 294 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 SLC48A1Q6P1K1 146 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 ZCCHC23Q6ZST2 131 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 COMMD6Q7Z4G1 85 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 SLC35E3Q7Z769 313 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 STAG3L4Q8TBR4 150 aa1.12□□□□□ -2.23
PALB2-203ENST00000565038 RNASE6Q93091 150 aaKnown RBP1.12□□□□□ -2.23
PALB2-203ENST00000565038 CPNE2Q96FN4 548 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms