RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CCSO14618 274 aa12.7□□□□□ -0.38
NME3-205ENST00000563854 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
NME3-205ENST00000563854 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
NME3-205ENST00000563854 PAX9P55771 341 aa12.7□□□□□ -0.38
NME3-205ENST00000563854 GPR82Q96P67 336 aa12.7□□□□□ -0.38
NME3-205ENST00000563854 SLC25A39Q9BZJ4 359 aaPredicted RBP12.7□□□□□ -0.38
NME3-205ENST00000563854 GOLT1BQ9Y3E0 138 aa12.7□□□□□ -0.38
NME3-205ENST00000563854 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
NME3-205ENST00000563854 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 HYPMO75409 117 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 DLK1P80370 383 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 SLC38A11Q08AI6 406 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 OR10P1Q8NGE3 313 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 UHRF2Q96PU4 802 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 NEU1Q99519 415 aa12.69□□□□□ -0.38
NME3-205ENST00000563854 RCL1Q9Y2P8 373 aaKnown RBP12.69□□□□□ -0.38
NME3-205ENST00000563854 TRAV6A0A075B6T7 132 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 TMEM189A5PLL7 270 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 LYRM1O43325 122 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 SPART-AS1P0CW21 52 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 ZNF846Q147U1 533 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 SHANK2-AS3Q9BTD1 123 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 TMEM208Q9BTX3 173 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 ARL6Q9H0F7 186 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 KMT2AQ03164 3969 aa12.68□□□□□ -0.38
NME3-205ENST00000563854 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
NME3-205ENST00000563854 PLA2G10O15496 165 aa12.67□□□□□ -0.38
NME3-205ENST00000563854 HBE1P02100 147 aa12.67□□□□□ -0.38
NME3-205ENST00000563854 SELENOTP62341 195 aa12.67□□□□□ -0.38
NME3-205ENST00000563854 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
NME3-205ENST00000563854 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
NME3-205ENST00000563854 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 L7N2F9 121 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 TSC22D2O75157 780 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 MBPP02686 304 aaPredicted RBP12.66□□□□□ -0.38
NME3-205ENST00000563854 AMBPP02760 352 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 PRB4P10163 310 aaPredicted RBP12.66□□□□□ -0.38
NME3-205ENST00000563854 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
NME3-205ENST00000563854 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
NME3-205ENST00000563854 VAMP2P63027 116 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 FAM222AQ5U5X8 452 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 TEPPQ6URK8 271 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 SEC22CQ9BRL7 303 aa12.66□□□□□ -0.38
NME3-205ENST00000563854 VPS13DQ5THJ4 4388 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 C5orf51A6NDU8 294 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 M0R2Z0 102 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 GOSR2O14653 212 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 DUSP14O95147 198 aaKnown RBP12.65□□□□□ -0.38
NME3-205ENST00000563854 TCRBP04435 133 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 HTN3P15516 51 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 BCAP31P51572 246 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 TAS2R30P59541 319 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 ARL16Q0P5N6 197 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 RRN3P1Q2M238 152 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 S100A7AQ86SG5 101 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 LRRC20Q8TCA0 184 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 NUDT15Q9NV35 164 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 NDUFA13Q9P0J0 144 aa12.65□□□□□ -0.38
NME3-205ENST00000563854 C7orf66A4D0T2 115 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 FNDC10F2Z333 226 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 PLP1P60201 277 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 AMTNQ6UX39 209 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 OR11H7Q8NGC8 314 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 ARV1Q9H2C2 271 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 DKK2Q9UBU2 259 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
NME3-205ENST00000563854 FRAS1Q86XX4 4008 aa12.64□□□□□ -0.39
NME3-205ENST00000563854 TEX48A0A1B0GUV7 120 aa12.63□□□□□ -0.39
NME3-205ENST00000563854 INSP01308 110 aa12.63□□□□□ -0.39
NME3-205ENST00000563854 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
NME3-205ENST00000563854 CAV2P51636 162 aa12.63□□□□□ -0.39
NME3-205ENST00000563854 RHOBP62745 196 aa12.63□□□□□ -0.39
NME3-205ENST00000563854 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
NME3-205ENST00000563854 ZNF431Q8TF32 576 aaPredicted RBP12.63□□□□□ -0.39
NME3-205ENST00000563854 NIPSNAP3BQ9BS92 247 aa12.63□□□□□ -0.39
NME3-205ENST00000563854 AGPAT2O15120 278 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 COX7A2P2O60397 106 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 S100A10P60903 97 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 PATE2Q6UY27 113 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 PPP1R14DQ9NXH3 145 aa12.62□□□□□ -0.39
NME3-205ENST00000563854 TRAV12-2A0A075B6T6 113 aa12.61□□□□□ -0.39
NME3-205ENST00000563854 A0A087X0K7 114 aa12.61□□□□□ -0.39
NME3-205ENST00000563854 A8MTW9 85 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms