RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 H3BRN7 92 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 TSPAN4O14817 238 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 NDUFB4O95168 129 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 IGHG4P01861 327 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 CLEC3BP05452 202 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 UBE2G2P60604 165 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 ATRAIDQ6UW56 229 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
SMPD3-205ENST00000563455 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 BIN3Q9NQY0 253 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 CLEC5AQ9NY25 188 aa10.79□□□□□ -0.68
SMPD3-205ENST00000563455 NBEAL1Q6ZS30 2694 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 SERTM2A0A1B0GWG4 89 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 OR2T8A6NH00 312 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 CLDN34H7C241 214 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
SMPD3-205ENST00000563455 ZNF253O75346 499 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 ELANEP08246 267 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 ATP5G3P48201 142 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
SMPD3-205ENST00000563455 BCL6BQ8N143 479 aaPredicted RBP10.78□□□□□ -0.68
SMPD3-205ENST00000563455 C5orf17Q8NAS9 161 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 OTORQ9NRC9 128 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 YTHDF2Q9Y5A9 579 aaKnown RBP10.78□□□□□ -0.68
SMPD3-205ENST00000563455 PLXNB1O43157 2135 aa10.78□□□□□ -0.68
SMPD3-205ENST00000563455 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 LINC01548A6NM66 108 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 K7EQM0 130 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 NDUFA4O00483 81 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 SCO1O75880 301 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 GP9P14770 177 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
SMPD3-205ENST00000563455 TPPP2P59282 170 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 BLCAPP62952 87 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 PSG9Q00887 426 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 CFHR3Q02985 330 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 ZNF674Q2M3X9 581 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 TEX38Q6PEX7 206 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 Q8N2B8 174 aa10.77□□□□□ -0.69
SMPD3-205ENST00000563455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
SMPD3-205ENST00000563455 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 OR10J4P0C629 311 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 GPR183P32249 361 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 BMI1P35226 326 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 ADMP35318 185 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 MYCNOSP40205 109 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 FOXE3Q13461 319 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 RNF212Q495C1 297 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 METTL26Q96S19 204 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 IMMP2LQ96T52 175 aa10.76□□□□□ -0.69
SMPD3-205ENST00000563455 A0A1W2PS18 150 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
SMPD3-205ENST00000563455 PF4V1P10720 104 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 NPPCP23582 126 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 S100PP25815 95 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 GNG4P50150 75 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 RPL23P62829 140 aaKnown RBP10.75□□□□□ -0.69
SMPD3-205ENST00000563455 RPL19P84098 196 aaKnown RBP10.75□□□□□ -0.69
SMPD3-205ENST00000563455 ADIRFQ15847 76 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 CLEC19AQ6UXS0 136 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 C2CD4CQ8TF44 421 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 GRAMD2BQ96HH9 432 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 CCDC140Q96MF4 163 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 CHRDL1Q9BU40 450 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 ELOVL1Q9BW60 279 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 EPDR1Q9UM22 224 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
SMPD3-205ENST00000563455 SVEP1Q4LDE5 3571 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 EIF3GO75821 320 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMPD3-205ENST00000563455 PSMB8P28062 276 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 ARL3P36405 182 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 AKR1C3P42330 323 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 RPL35P42766 123 aaKnown RBP10.74□□□□□ -0.69
SMPD3-205ENST00000563455 GALR1P47211 349 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 FOXL1Q12952 345 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 USF2Q15853 346 aaPredicted RBP10.74□□□□□ -0.69
SMPD3-205ENST00000563455 SAMD13Q5VXD3 122 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 MORN5Q5VZ52 161 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 TOMM20LQ6UXN7 152 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 OR8I2Q8N0Y5 310 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 RNF152Q8N8N0 203 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 CMTM2Q8TAZ6 248 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 FMC1Q96HJ9 113 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 OR5B12Q96R08 314 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 ATG101Q9BSB4 218 aa10.74□□□□□ -0.69
SMPD3-205ENST00000563455 TRBV6-1A0A0K0K1D8 114 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 SCO2A0A1W2PP80 73 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 PGPA6NDG6 321 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 H7BYZ3 331 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 PEX7O00628 323 aa10.73□□□□□ -0.69
SMPD3-205ENST00000563455 GGCTO75223 188 aaKnown RBP10.73□□□□□ -0.69
SMPD3-205ENST00000563455 IGLC2P0DOY2 106 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms