RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 STXBP6Q8NFX7 210 aa14.15□□□□□ -0.14
RAB40C-207ENST00000563109 OR2G3Q8NGZ4 309 aa14.15□□□□□ -0.14
RAB40C-207ENST00000563109 SLC25A32Q9H2D1 315 aa14.15□□□□□ -0.14
RAB40C-207ENST00000563109 RPL7P18124 248 aaKnown RBP14.14□□□□□ -0.15
RAB40C-207ENST00000563109 TFPI2P48307 235 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 SERF2P84101 59 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 LGALSLQ3ZCW2 172 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-207ENST00000563109 GCSAMLQ5JQS6 135 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 FAM78BQ5VT40 261 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 GBGT1Q8N5D6 347 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 PRR25Q96S07 402 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 MRPL32Q9BYC8 188 aaKnown RBP14.14□□□□□ -0.15
RAB40C-207ENST00000563109 MS4A6AQ9H2W1 248 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 MGAM2Q2M2H8 2515 aa14.14□□□□□ -0.15
RAB40C-207ENST00000563109 TRAV2A0A0B4J234 112 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 ZNF785A8K8V0 405 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 MBP02144 154 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 ATF4P18848 351 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-207ENST00000563109 M6PRP20645 277 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 SH3BGRL3Q9H299 93 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 NRN1Q9NPD7 142 aa14.13□□□□□ -0.15
RAB40C-207ENST00000563109 TPT1P13693 172 aaKnown RBP14.12□□□□□ -0.15
RAB40C-207ENST00000563109 RHOBP62745 196 aa14.12□□□□□ -0.15
RAB40C-207ENST00000563109 BPIFA4PQ86YQ2 179 aa14.12□□□□□ -0.15
RAB40C-207ENST00000563109 WFDC3Q8IUB2 231 aa14.12□□□□□ -0.15
RAB40C-207ENST00000563109 C9orf62Q8N4C0 152 aa14.12□□□□□ -0.15
RAB40C-207ENST00000563109 RFNGQ9Y644 331 aa14.12□□□□□ -0.15
RAB40C-207ENST00000563109 MEOX2P50222 304 aa14.11□□□□□ -0.15
RAB40C-207ENST00000563109 CD81P60033 236 aa14.11□□□□□ -0.15
RAB40C-207ENST00000563109 SAMD13Q5VXD3 122 aa14.11□□□□□ -0.15
RAB40C-207ENST00000563109 MORN5Q5VZ52 161 aa14.11□□□□□ -0.15
RAB40C-207ENST00000563109 AURKAIP1Q9NWT8 199 aaPredicted RBP14.11□□□□□ -0.15
RAB40C-207ENST00000563109 FUT9Q9Y231 359 aa14.11□□□□□ -0.15
RAB40C-207ENST00000563109 A0A1W2PPV4 95 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 RAB2AP61019 212 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 AKR1C8PQ5T2L2 129 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 OR10G4Q8NGN3 311 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 OR10G9Q8NGN4 311 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 OR10G7Q8NGN6 311 aa14.1□□□□□ -0.15
RAB40C-207ENST00000563109 SEPSECSQ9HD40 501 aaKnown RBP14.1□□□□□ -0.15
RAB40C-207ENST00000563109 SPP1P10451 314 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 NKX2-5P52952 324 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-207ENST00000563109 CMC4P56277 68 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-207ENST00000563109 TAS2R45P59539 299 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 TMEM41BQ5BJD5 291 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 FAM122CQ6P4D5 195 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 MIR17HGQ75NE6 70 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 BAP18Q8IXM2 172 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 STOML3Q8TAV4 291 aa14.09□□□□□ -0.15
RAB40C-207ENST00000563109 TRAV5A0A0B4J249 113 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 K7EQG2 157 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 PRB2P02812 416 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-207ENST00000563109 KHDC3LQ587J8 217 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 SPATA31B1PQ5VZV4 182 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 SLC51BQ86UW2 128 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 DCANP1Q8TF63 244 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 SORL1Q92673 2214 aa14.08□□□□□ -0.16
RAB40C-207ENST00000563109 A0A087X0K7 114 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 CD7P09564 240 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 SEC11BP0C7V7 166 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 ID1P41134 155 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 CDC34P49427 236 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-207ENST00000563109 SNRPD3P62318 126 aaKnown RBP14.07□□□□□ -0.16
RAB40C-207ENST00000563109 EIF5AL1Q6IS14 154 aaKnown RBP14.07□□□□□ -0.16
RAB40C-207ENST00000563109 SLC25A2Q9BXI2 301 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 TMEM14CQ9P0S9 112 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 SMAD5-AS1Q9Y6J3 95 aa14.07□□□□□ -0.16
RAB40C-207ENST00000563109 OR11H12B2RN74 326 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 OR7C2O60412 319 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 LRRC20Q8TCA0 184 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 C16orf92Q96LL3 132 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 ACTR3CQ9C0K3 210 aaPredicted RBP14.06□□□□□ -0.16
RAB40C-207ENST00000563109 UBQLN2Q9UHD9 624 aa14.06□□□□□ -0.16
RAB40C-207ENST00000563109 MRPS12O15235 138 aaKnown RBP14.05□□□□□ -0.16
RAB40C-207ENST00000563109 ZNF688P0C7X2 276 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 PSMB3P49720 205 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 GUK1Q16774 197 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 LCN15Q6UWW0 184 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 FAM110AQ9BQ89 295 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 RPRMQ9NS64 109 aa14.05□□□□□ -0.16
RAB40C-207ENST00000563109 UMAD1C9J7I0 102 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 ISLRO14498 428 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 IGLC2P0DOY2 106 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 DEFA6Q01524 100 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 ODF3L2Q3SX64 289 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 RPP25LQ8N5L8 163 aaKnown RBP14.04□□□□□ -0.16
RAB40C-207ENST00000563109 TMED6Q8WW62 240 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 FAM167A-AS1Q96KT0 104 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 OR51M1Q9H341 326 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 HRH4Q9H3N8 390 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 MAP6D1Q9H9H5 199 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 DNAH3Q8TD57 4116 aa14.04□□□□□ -0.16
RAB40C-207ENST00000563109 PYYP10082 97 aa14.03□□□□□ -0.16
RAB40C-207ENST00000563109 HIST1H1EP10412 219 aaKnown RBP14.03□□□□□ -0.16
RAB40C-207ENST00000563109 UBE2L3P68036 154 aaKnown RBP14.03□□□□□ -0.16
RAB40C-207ENST00000563109 PSMG4Q5JS54 123 aa14.03□□□□□ -0.16
RAB40C-207ENST00000563109 PQLC2Q6ZP29 291 aa14.03□□□□□ -0.16
RAB40C-207ENST00000563109 Q8N1Y9 231 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms