RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 RHOGP84095 191 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 KLRD1Q13241 179 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 USMG5Q96IX5 58 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 SLC50A1Q9BRV3 221 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 IMMP2LQ96T52 175 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 MED12LQ86YW9 2145 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 TRBV24-1A0A075B6N3 115 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 A0A1W2PRE2 83 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 CXCL1P09341 107 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 OR5AL1P0C617 328 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 CAMPP49913 170 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 TOMM40O96008 361 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 SNRPD3P62318 126 aaKnown RBP6.12□□□□□ -1.43
TCF4-216ENST00000562680 TM4SF20Q53R12 229 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 STPG4Q8N801 248 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 TMEM14BQ9NUH8 114 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 TMEM242Q9NWH2 141 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 PEMTQ9UBM1 199 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 H3BUX3 64 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 IER3P46695 156 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 CX3CL1P78423 397 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 TREML4Q6UXN2 200 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 ATOH7Q8N100 152 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 TLN1Q9Y490 2541 aaKnown RBP6.11□□□□□ -1.43
TCF4-216ENST00000562680 TSPAN13O95857 204 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 GGTLC1Q9BX51 225 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 FAM223BA6NKX1 122 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 SNURFLB1AK76 121 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 CR1LQ2VPA4 569 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 FAM223AQ8IWN6 122 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 CYTL1Q9NRR1 136 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 TRBV9A0A0B4J1U6 114 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 ATP5LO75964 103 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 WISP2O76076 250 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 RNASE2P10153 161 aaKnown RBP6.11□□□□□ -1.43
TCF4-216ENST00000562680 RASL11AQ6T310 242 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 LIME1Q9H400 295 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 CTSZQ9UBR2 303 aa6.11□□□□□ -1.43
TCF4-216ENST00000562680 TRBV7-1A0A0A6YYK4 115 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 C15orf62A8K5M9 175 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 MMP23AO75900 390 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 HLA-DRB1P01911 266 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 ORM1P02763 201 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 IFITM1P13164 125 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 Q1RN00 199 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 OTORQ9NRC9 128 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 A0A1B0GW64 132 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 WFDC12Q8WWY7 111 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 ASCL2Q99929 193 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 SPANXDQ9BXN6 97 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 OR2T8A6NH00 312 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
TCF4-216ENST00000562680 C10orf55Q5SWW7 151 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 CLEC19AQ6UXS0 136 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 RARRES2Q99969 163 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
TCF4-216ENST00000562680 A0A0G2JRQ6 117 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 GAGE13Q4V321 117 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 IBA57Q5T440 356 aaKnown RBP6.1□□□□□ -1.43
TCF4-216ENST00000562680 Q6ZRM9 215 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 C8orf46Q8TAG6 207 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 MRAPQ8TCY5 172 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 TMEM70Q9BUB7 260 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 SRP19P09132 144 aaKnown RBP6.1□□□□□ -1.43
TCF4-216ENST00000562680 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 SAMD5Q5TGI4 173 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 FAM110DQ8TAY7 271 aaPredicted RBP6.1□□□□□ -1.43
TCF4-216ENST00000562680 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 WFDC1Q9HC57 220 aa6.1□□□□□ -1.43
TCF4-216ENST00000562680 SHANK1Q9Y566 2161 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 RNF223E7ERA6 249 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 K7EP34 96 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 IGKV1-16P04430 117 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 CRYBB3P26998 211 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 ZNF137PP52743 207 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 NDUFA4L2Q9NRX3 87 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 TRAV3A0A0B4J244 114 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 DUX4L9Q6RFH8 374 aaPredicted RBP6.09□□□□□ -1.43
TCF4-216ENST00000562680 SGMS2Q8NHU3 365 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 C10orf105Q8TEF2 133 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 AGMATQ9BSE5 352 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 M0QXV9 152 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 PEX7O00628 323 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 IGHV3-48P01763 117 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 CMC4P56277 68 aaPredicted RBP6.09□□□□□ -1.43
TCF4-216ENST00000562680 KCNS1Q96KK3 526 aa6.09□□□□□ -1.43
TCF4-216ENST00000562680 TRAV9-1A0A075B6T8 112 aa6.09□□□□□ -1.44
TCF4-216ENST00000562680 APCSP02743 223 aa6.09□□□□□ -1.44
TCF4-216ENST00000562680 CD24P25063 80 aa6.09□□□□□ -1.44
TCF4-216ENST00000562680 DEFB113Q30KQ7 82 aa6.09□□□□□ -1.44
TCF4-216ENST00000562680 FMC1Q96HJ9 113 aa6.09□□□□□ -1.44
TCF4-216ENST00000562680 GRIFINA4D1Z8 144 aa6.08□□□□□ -1.44
TCF4-216ENST00000562680 SAP30O75446 220 aa6.08□□□□□ -1.44
TCF4-216ENST00000562680 PF4P02776 101 aa6.08□□□□□ -1.44
TCF4-216ENST00000562680 PAX8Q06710 450 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms