RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 IGKV1D-37A0A075B6S9 117 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 IGKV1OR2-108A0A075B7D4 117 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 TRBV7-1A0A0A6YYK4 115 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CEBPZOSA8MTT3 80 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 A8MWP6 167 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 G3V3Q6 166 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 K7EPK0 472 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 LGALS9O00182 355 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 TGOLN2O43493 480 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CCNKO75909 580 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 SIX6O95475 246 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 DHFRP00374 187 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 IGKV1-17P01599 117 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 IGHV3-48P01763 117 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CSN3P07498 182 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 IAPPP10997 89 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 DEFA4P12838 97 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 IGLL1P15814 213 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CXCL3P19876 107 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 NPY1RP25929 384 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 GPR183P32249 361 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 RGS21Q2M5E4 152 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 PRSS54Q6PEW0 395 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CLEC19AQ6UXS0 136 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 UNQ9165/PRO28630Q6UXU0 137 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 GPHB5Q86YW7 130 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 OR4X1Q8NH49 305 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 RNASEH2CQ8TDP1 164 aaKnown RBP3.37□□□□□ -1.87
SMG1-206ENST00000562668 EEF1AKMT3Q96AZ1 226 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 SMIM8Q96KF7 97 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CXorf58Q96LI9 332 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 C2orf50Q96LR7 162 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 TXN2Q99757 166 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 PDCD10Q9BUL8 212 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 C21orf62Q9NYP8 219 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 THYN1Q9P016 225 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 CACFD1Q9UGQ2 172 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 U3KQ87 197 aa3.37□□□□□ -1.87
SMG1-206ENST00000562668 TRAV14DV4A0A0A6YYC5 116 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 TMEM213A2RRL7 107 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 OR2T8A6NH00 312 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 H3BP45 60 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 CORTO00230 105 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 WRBO00258 174 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 GOSR2O14653 212 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 OVOL1O14753 267 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 TSC22D2O75157 780 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 GGCTO75223 188 aaKnown RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 CLN5O75503 358 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 MED6O75586 246 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 IFNA21P01568 189 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 IGLC1P0CG04 106 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 C8orf88P0DMB2 117 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 ZP3P21754 424 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 GPX4P36969 197 aaPredicted RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 SNCAP37840 140 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 SUB1P53999 127 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMG1-206ENST00000562668 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 TAS2R30P59541 319 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 GAMTQ14353 236 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 TMEM182Q6ZP80 229 aaPredicted RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 THAP8Q8NA92 274 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 UXS1Q8NBZ7 420 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 OR10G8Q8NGN5 311 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 OR9G4Q8NGQ1 327 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 PINX1Q96BK5 328 aaKnown RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 BSCL2Q96G97 398 aaPredicted RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 NMES1Q9C002 83 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 GPN1Q9HCN4 374 aaPredicted RBP3.36□□□□□ -1.87
SMG1-206ENST00000562668 ZC4H2Q9NQZ6 224 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 SIGLEC8Q9NYZ4 499 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 OR5AC2Q9NZP5 309 aa3.36□□□□□ -1.87
SMG1-206ENST00000562668 NOTCH1P46531 2555 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 IGHV3-35A0A0C4DH35 117 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 IGSF23A1L1A6 192 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 IZUMO1RA6ND01 250 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 C5orf51A6NDU8 294 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 FAM24AA6NFZ4 105 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 C2orf70A6NJV1 201 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 FAM25EA8MYX2 175 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 SEC14L6B5MCN3 397 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 NDUFA4O00483 81 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 CYB5BO43169 146 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 SSSCA1O60232 199 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 DEDDO75618 318 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 IFNA10P01566 189 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 SLC25A4P12235 298 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 OPRK1P41145 380 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 RND2P52198 227 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 RPEL1Q2QD12 228 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 VWC2Q2TAL6 325 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 TIGITQ495A1 244 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 Q5BKY6 102 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 SPANXN5Q5MJ07 72 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms