RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 HLA-DRB4P13762 266 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 CXCL3P19876 107 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 ANXA7P20073 488 aaKnown RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 GPX4P36969 197 aaPredicted RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 NUP62P37198 522 aaPredicted RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 UBE2MP61081 183 aaKnown RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 NUTF2P61970 127 aaKnown RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 TMEM41BQ5BJD5 291 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 LGALS9CQ6DKI2 356 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 OR8G2PQ6IF36 304 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 OR8I2Q8N0Y5 310 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 CSNK1G2-AS1Q8NCQ2 148 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 ZNF431Q8TF32 576 aaPredicted RBP5.96□□□□□ -1.46
GINS3-204ENST00000561952 HYLS1Q96M11 299 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 SEC22CQ9BRL7 303 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 DOK5Q9P104 306 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 PFDN2Q9UHV9 154 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 TMED3Q9Y3Q3 217 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 HLA-DRB4X5D2U9 266 aa5.96□□□□□ -1.46
GINS3-204ENST00000561952 IGHV4-4A0A075B6R2 117 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 TRAV10A0A0B4J240 114 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 SSNA1O43805 119 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 SSSCA1O60232 199 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 GIPP09681 153 aaPredicted RBP5.95□□□□□ -1.46
GINS3-204ENST00000561952 OR4E1P0C645 316 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 ORM2P19652 201 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 ID1P41134 155 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 NKX2-5P52952 324 aaPredicted RBP5.95□□□□□ -1.46
GINS3-204ENST00000561952 RAP2BP61225 183 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 POLR2GP62487 172 aaKnown RBP eCLIP5.95□□□□□ -1.46
GINS3-204ENST00000561952 RPP30P78346 268 aaKnown RBP5.95□□□□□ -1.46
GINS3-204ENST00000561952 IFITM2Q01629 132 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 FGL1Q08830 312 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 ACOT7LQ6ZUV0 252 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 OR1B1Q8NGR6 318 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 C16orf92Q96LL3 132 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 CIB3Q96Q77 187 aaPredicted RBP5.95□□□□□ -1.46
GINS3-204ENST00000561952 TRGV9Q99603 122 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 SCRT1Q9BWW7 348 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 C1QTNF4Q9BXJ3 329 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 SLC35B3Q9H1N7 401 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 SLC25A32Q9H2D1 315 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 APLNQ9ULZ1 77 aa5.95□□□□□ -1.46
GINS3-204ENST00000561952 DEFB131BA0A096LNP1 70 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 PIGBOS1A0A0B4J2F0 54 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 C9orf170A2RU37 121 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 A6NJY4 79 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 C11orf94C9JXX5 98 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 G3V3Q6 166 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 SLC25A6P12236 298 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 NKX2-1P43699 371 aaPredicted RBP5.94□□□□□ -1.46
GINS3-204ENST00000561952 PSMB3P49720 205 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 C12orf74Q32Q52 190 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 C4orf46Q504U0 113 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 TMEM182Q6ZP80 229 aaPredicted RBP5.94□□□□□ -1.46
GINS3-204ENST00000561952 FOXI2Q6ZQN5 318 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 LRTM2Q8N967 370 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 THAP8Q8NA92 274 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 BPIFCQ8NFQ6 507 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 C20orf173Q96LM9 149 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 RSG1Q9BU20 258 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 HRH4Q9H3N8 390 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 SAV1Q9H4B6 383 aaPredicted RBP5.94□□□□□ -1.46
GINS3-204ENST00000561952 PSENENQ9NZ42 101 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 MGAT4CQ9UBM8 478 aa5.94□□□□□ -1.46
GINS3-204ENST00000561952 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
GINS3-204ENST00000561952 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 ZNF98A6NK75 572 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 PRSS46E5RG02 174 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 SOCS3O14543 225 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 ZNF705DP0CH99 300 aaPredicted RBP5.93□□□□□ -1.46
GINS3-204ENST00000561952 ZNF705BP0CI00 300 aaPredicted RBP5.93□□□□□ -1.46
GINS3-204ENST00000561952 HTN3P15516 51 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 GALR1P47211 349 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 ATP5IP56385 69 aaPredicted RBP5.93□□□□□ -1.46
GINS3-204ENST00000561952 FAM78BQ5VT40 261 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 EBLN2Q6P2I7 272 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 C9orf62Q8N4C0 152 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 C12orf45Q8N5I9 185 aaPredicted RBP5.93□□□□□ -1.46
GINS3-204ENST00000561952 RNF182Q8N6D2 247 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 ZNF709Q8N972 641 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 MITD1Q8WV92 249 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 TMEM147Q9BVK8 224 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 DNAH2Q9P225 4427 aa5.93□□□□□ -1.46
GINS3-204ENST00000561952 HMSDA8MTL9 139 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 ISLRO14498 428 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 CCSO14618 274 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 IFNA21P01568 189 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 SNRPCP09234 159 aaKnown RBP5.92□□□□□ -1.46
GINS3-204ENST00000561952 OR5G3P0C626 314 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 METTL15P1P0C7V9 234 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 PSG9Q00887 426 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 Q5BKY6 102 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 C1orf194Q5T5A4 169 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 CYP2G1PQ6ZSU1 146 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 OR11H4Q8NGC9 324 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 TMEM208Q9BTX3 173 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 SEPSECSQ9HD40 501 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms