RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RNASE11Q8TAA1 199 aaKnown RBP2.51□□□□□ -2.01
SMG1-204ENST00000561940 OR52E6Q96RD3 313 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 TMEM106BQ9NUM4 274 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 NDUFB11Q9NX14 153 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 PRELID1Q9Y255 219 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 ANK2Q01484 3957 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 RYR3Q15413 4870 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 TENM3Q9P273 2699 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 HEATR5AQ86XA9 2040 aa2.51□□□□□ -2.01
SMG1-204ENST00000561940 A0A0D9SEW6 157 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 E7EQ34 232 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 H3BRN7 92 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 PCOTHQ58A44 107 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 PABPC1L2AQ5JQF8 200 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 FAM201AQ5SY85 155 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 LHFPL1Q86WI0 220 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 TRAPPC5Q8IUR0 188 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 ZNF283Q8N7M2 679 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 OR5J2Q8NH18 312 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 LHFPL5Q8TAF8 219 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 XAGE1AQ9HD64 81 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 VPS29Q9UBQ0 182 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 TENM1Q9UKZ4 2725 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 FREM1Q5H8C1 2179 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 MALRD1Q5VYJ5 2156 aa2.5□□□□□ -2.01
SMG1-204ENST00000561940 SORL1Q92673 2214 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 BPGMP07738 259 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 RPS17P08708 135 aaKnown RBP2.49□□□□□ -2.01
SMG1-204ENST00000561940 CD79AP11912 226 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 IFI30P13284 250 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 PEBP1P30086 187 aaKnown RBP2.49□□□□□ -2.01
SMG1-204ENST00000561940 ALDH3A1P30838 453 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 HAAOP46952 286 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 HINT1P49773 126 aaPredicted RBP2.49□□□□□ -2.01
SMG1-204ENST00000561940 PMAIP1Q13794 54 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 MIAQ16674 131 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 GLT8D1Q68CQ7 371 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 SPOPLQ6IQ16 392 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 C1orf158Q8N1D5 194 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 ZNF675Q8TD23 568 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 SLC35B4Q969S0 331 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 CNBD2Q96M20 576 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 OR51V1Q9H2C8 321 aa2.49□□□□□ -2.01
SMG1-204ENST00000561940 TRGV5A0A0B4J1U4 118 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 BHLHE40O14503 412 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 KLRC4O43908 158 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 UQCRHP07919 91 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 RAB13P51153 203 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 EMP1P54849 157 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 PSME3P61289 254 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 TNFAIP6P98066 277 aaPredicted RBP2.48□□□□□ -2.01
SMG1-204ENST00000561940 SYPL2Q5VXT5 272 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 SLC35E3Q7Z769 313 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 RSL24D1Q9UHA3 163 aaKnown RBP2.48□□□□□ -2.01
SMG1-204ENST00000561940 SAMHD1Q9Y3Z3 626 aaKnown RBP2.48□□□□□ -2.01
SMG1-204ENST00000561940 DOCK10Q96BY6 2186 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 VWFP04275 2813 aa2.48□□□□□ -2.01
SMG1-204ENST00000561940 SVEP1Q4LDE5 3571 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 RFPL4AA6NLU0 287 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 EEF1E1-BLOC1S5C9J1V9 151 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 RFPL4AL1F8VTS6 287 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 PSMD12O00232 456 aaPredicted RBP2.47□□□□□ -2.01
SMG1-204ENST00000561940 LST1O00453 97 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 OR2B3O76000 313 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 RPL30P62888 115 aaKnown RBP2.47□□□□□ -2.01
SMG1-204ENST00000561940 TAC4Q86UU9 113 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 OOSP2Q86WS3 158 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 OR51D1Q8NGF3 324 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 ZNF418Q8TF45 676 aaPredicted RBP2.47□□□□□ -2.01
SMG1-204ENST00000561940 COX14Q96I36 57 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 C8orf76Q96K31 380 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
SMG1-204ENST00000561940 A0A096LNT2 108 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 TMEM269A0A1B0GVZ9 245 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 A0A1B0GX78 115 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 DEFB108AA8MXU0 73 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 PLA2G10O15496 165 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 CREBL2O60519 120 aaPredicted RBP2.46□□□□□ -2.02
SMG1-204ENST00000561940 COX6A1P12074 109 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 PSMB8P28062 276 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 SRP14P37108 136 aaKnown RBP2.46□□□□□ -2.02
SMG1-204ENST00000561940 ZNF90Q03938 601 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 BRMS1LQ5PSV4 323 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 C20orf196Q8IYI0 205 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 ANKRD7Q92527 254 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 DCUN1D1Q96GG9 259 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 RBM7Q9Y580 266 aaKnown RBP2.46□□□□□ -2.02
SMG1-204ENST00000561940 TCHHQ07283 1943 aa2.46□□□□□ -2.02
SMG1-204ENST00000561940 CPAMD8Q8IZJ3 1885 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 TGIF2-C20orf24A0A0A6YYL0 155 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 TRAV41A0A0B4J266 112 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 A0A0J9YW62 118 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 LCE6AA0A183 80 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 S1PR2O95136 353 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 IGKV1-16P04430 117 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms