RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 SNAI2O43623 268 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 HLA-DQA1P01909 254 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 GPR6P46095 362 aaPredicted RBP8.79□□□□□ -1
NEIL1-202ENST00000561643 ZNF137PP52743 207 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 PRB3Q04118 309 aaPredicted RBP8.79□□□□□ -1
NEIL1-202ENST00000561643 TBR1Q16650 682 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 SSX8Q7RTT4 187 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 BLNKQ8WV28 456 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 JKAMPQ9P055 326 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 C2orf70A6NJV1 201 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 IGLC1P0CG04 106 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 Q8NA96 180 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 FAM168AQ92567 244 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 FXYD5Q96DB9 178 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 MCRIP2Q9BUT9 160 aaKnown RBP8.79□□□□□ -1
NEIL1-202ENST00000561643 TMEM133Q9H2Q1 129 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 ADGRG4Q8IZF6 3080 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 IGHV3-21A0A0B4J1V1 117 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 IZUMO1RA6ND01 250 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 GAGE10A6NGK3 116 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 SHISA9B4DS77 424 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 DLX1P56177 255 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 CKS1BP61024 79 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 GNG5P63218 68 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 PERPQ96FX8 193 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 KAAG1Q9UBP8 84 aa8.79□□□□□ -1
NEIL1-202ENST00000561643 RPL27AP46776 148 aaKnown RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 PRR30Q53SZ7 412 aaPredicted RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 SLC25A34Q6PIV7 304 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 ZNF48Q96MX3 618 aaPredicted RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 SS18L2Q9UHA2 77 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 SLC25A5P05141 298 aaKnown RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 UQCRFS1P47985 274 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 SPACA3Q8IXA5 215 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 ATP6V0BQ99437 205 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 H0Y8G0 127 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 CNTFRP26992 372 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 C12orf54Q6X4T0 127 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 SGK494Q96LW2 274 aa8.78□□□□□ -1
NEIL1-202ENST00000561643 SSBP4Q9BWG4 385 aaPredicted RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
NEIL1-202ENST00000561643 ATMQ13315 3056 aa8.77□□□□□ -1
NEIL1-202ENST00000561643 G3V4G9 280 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 MFAP2P55001 183 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 FOXE3Q13461 319 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 TEX45Q8NA69 505 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 C7orf71A4D174 169 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 FSTL3O95633 263 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 MRGPRG-AS1Q2M3A8 158 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1.01
NEIL1-202ENST00000561643 POLEQ07864 2286 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 TLN1Q9Y490 2541 aaKnown RBP8.76□□□□□ -1.01
NEIL1-202ENST00000561643 PPIAL4CA0A0B4J2A2 164 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 PGPA6NDG6 321 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 LYNX1G3V0Z9 82 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 CD5LO43866 347 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 LYNX1P0DP58 116 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 GRAMD2BQ96HH9 432 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
NEIL1-202ENST00000561643 ST20Q9HBF5 79 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
NEIL1-202ENST00000561643 EPDR1Q9UM22 224 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 COX7A1P24310 79 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 APOBEC3AP31941 199 aaPredicted RBP8.76□□□□□ -1.01
NEIL1-202ENST00000561643 TCTAP57738 103 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 TRGV9Q99603 122 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 ZNF835Q9Y2P0 537 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 CRYGCP07315 174 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 CD3EP07766 207 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
NEIL1-202ENST00000561643 GDF5OSQ5U4N7 250 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 NUP35Q8NFH5 326 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 PMCHL2Q9BQD1 86 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
NEIL1-202ENST00000561643 MALRD1Q5VYJ5 2156 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 B9A039 149 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 H3BTX0 84 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 GATA3P23771 443 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 CAMPP49913 170 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 MBD6Q96DN6 1003 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 TIMM8BQ9Y5J9 83 aaPredicted RBP8.75□□□□□ -1.01
NEIL1-202ENST00000561643 ABCA1O95477 2261 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 SPTAN1Q13813 2472 aaKnown RBP8.75□□□□□ -1.01
NEIL1-202ENST00000561643 IGHV1-3A0A0C4DH29 117 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.75□□□□□ -1.01
NEIL1-202ENST00000561643 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
NEIL1-202ENST00000561643 HIGD1CA8MV81 97 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 CNIH1O95406 144 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 FAM87AP0C7U9 286 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 CD24P25063 80 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 MYCNOSP40205 109 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 ARF6P62330 175 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 PPP1R27Q86WC6 154 aa8.74□□□□□ -1.01
NEIL1-202ENST00000561643 TMEM116Q8NCL8 245 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms