RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 B4DSR2 109 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 JMJD7-PLA2G4BH0Y9G9 81 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 PPYP01298 95 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 SPINT3P49223 89 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 SPATA45Q537H7 98 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 MUCL1Q96DR8 90 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 ZC2HC1AQ96GY0 325 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 PARVBQ9HBI1 364 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 JPT1Q9UK76 154 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
USP8-218ENST00000561330 FREM3P0C091 2139 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 ZGRF1Q86YA3 2104 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 PLB1Q6P1J6 1458 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 ASH1LQ9NR48 2969 aaKnown RBP0.05□□□□□ -2.4
USP8-218ENST00000561330 TRBV19A0A075B6N1 114 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 A0A087WSZ3 146 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 C17orf112F2Z3M2 114 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 SERPINB9P50453 376 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 OR8J2Q8NGG1 315 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 ARL5BQ96KC2 179 aa0.05□□□□□ -2.4
USP8-218ENST00000561330 FAM103A1Q9BTL3 118 aaKnown RBP0.05□□□□□ -2.4
USP8-218ENST00000561330 TRAV23DV6A0A075B6W5 121 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 TRBV30A0A0K0K1B3 111 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 NUPR2A6NF83 97 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 M0R233 179 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 FXYD6P3P58550 94 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 UBE2BP63146 152 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 C1orf134Q5TEV5 83 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 EIF5AL1Q6IS14 154 aaKnown RBP0.04□□□□□ -2.4
USP8-218ENST00000561330 GLIPR1L1Q6UWM5 242 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 OR5AS1Q8N127 324 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 RAB37Q96AX2 223 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 GGACTQ9BVM4 153 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 IMUPQ9GZP8 106 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 OR52A1Q9UKL2 312 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 RFX7Q2KHR2 1363 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 CCDC144AA2RUR9 1427 aa0.04□□□□□ -2.4
USP8-218ENST00000561330 PTPRFP10586 1907 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 C5orf67F2Z3F1 127 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 TAX1BP3O14907 124 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 ITGB3BPQ13352 177 aaPredicted RBP0.03□□□□□ -2.4
USP8-218ENST00000561330 OTUD6BQ8N6M0 293 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 KIFC1Q9BW19 673 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 CCDC94Q9BW85 323 aaPredicted RBP0.03□□□□□ -2.4
USP8-218ENST00000561330 KNTC1P50748 2209 aa0.03□□□□□ -2.4
USP8-218ENST00000561330 PLXNA4Q9HCM2 1894 aa0.03□□□□□ -2.41
USP8-218ENST00000561330 IGF2RP11717 2491 aa0.03□□□□□ -2.41
USP8-218ENST00000561330 CST8O60676 142 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 GGCTO75223 188 aaKnown RBP0.02□□□□□ -2.41
USP8-218ENST00000561330 OR7C1O76099 320 aaPredicted RBP0.02□□□□□ -2.41
USP8-218ENST00000561330 OR10J4P0C629 311 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 ATP5G3P48201 142 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 MYL6P60660 151 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 OR10AG1Q8NH19 301 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 BTF3L4Q96K17 158 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 SIGMAR1Q99720 223 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 NPCDR1Q9BY65 106 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 HSPB8Q9UJY1 196 aa0.02□□□□□ -2.41
USP8-218ENST00000561330 SIP14410 1827 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 MEGF8Q7Z7M0 2845 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 RGS21Q2M5E4 152 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 POP5Q969H6 163 aaKnown RBP0.01□□□□□ -2.41
USP8-218ENST00000561330 PPP1R14BQ96C90 147 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 NMNAT1Q9HAN9 279 aaPredicted RBP0.01□□□□□ -2.41
USP8-218ENST00000561330 RNF11Q9Y3C5 154 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 ZFYVE9O95405 1425 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 OBSL1O75147 1896 aa0.01□□□□□ -2.41
USP8-218ENST00000561330 IFNA7P01567 189 aa0□□□□□ -2.41
USP8-218ENST00000561330 HLA-EP13747 358 aa0□□□□□ -2.41
USP8-218ENST00000561330 SPA17Q15506 151 aa0□□□□□ -2.41
USP8-218ENST00000561330 OR5D16Q8NGK9 328 aa0□□□□□ -2.41
USP8-218ENST00000561330 TEX37Q96LM6 180 aa0□□□□□ -2.41
USP8-218ENST00000561330 PARVGQ9HBI0 331 aa0□□□□□ -2.41
USP8-218ENST00000561330 TMEM256-PLSCR3K7ERE1 68 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 CD14P08571 375 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 RAB5CP51148 216 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 CCL7P80098 99 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 LIN52Q52LA3 116 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 TCEAL2Q9H3H9 227 aaPredicted RBP-0.01□□□□□ -2.41
USP8-218ENST00000561330 OPTCQ9UBM4 332 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 LOC285556D6RIA3 1793 aa-0.01□□□□□ -2.41
USP8-218ENST00000561330 DMBT1Q9UGM3 2413 aaPredicted RBP-0.02□□□□□ -2.41
USP8-218ENST00000561330 BCL9O00512 1426 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 TRAV27A0A087WT01 109 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 ZNF727A8MUV8 499 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 IGLV1-51P01701 117 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 DYNLT3P51808 116 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 SPINK6Q6UWN8 80 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 ARPINQ7Z6K5 226 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 SLC22A13Q9Y226 551 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 ARL5AQ9Y689 179 aa-0.02□□□□□ -2.41
USP8-218ENST00000561330 MYO5AQ9Y4I1 1855 aaKnown RBP-0.02□□□□□ -2.41
USP8-218ENST00000561330 ANKRD17O75179 2603 aaKnown RBP-0.02□□□□□ -2.41
USP8-218ENST00000561330 KIF1BO60333 1816 aa-0.03□□□□□ -2.41
USP8-218ENST00000561330 FAM159BA6NKW6 160 aa-0.03□□□□□ -2.41
USP8-218ENST00000561330 TMEM114B3SHH9 223 aa-0.03□□□□□ -2.41
USP8-218ENST00000561330 CDKN2CP42773 168 aa-0.03□□□□□ -2.41
USP8-218ENST00000561330 VBP1P61758 197 aa-0.03□□□□□ -2.41
USP8-218ENST00000561330 PRAP1Q96NZ9 151 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms