RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 NAP1L6A6NFF2 107 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 IL5P05113 134 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 INPP1P49441 399 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 OXA1LQ15070 435 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 BAK1Q16611 211 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
SNX1-213ENST00000561026 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 FLVCR2Q9UPI3 526 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 YTHDF2Q9Y5A9 579 aaKnown RBP11.54□□□□□ -0.56
SNX1-213ENST00000561026 TRAV8-2A0A0B4J237 113 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 SMCO3A2RU48 225 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 PMS2P5A8MQ11 134 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 H3BRN7 92 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 ZNF701M0R085 212 aaPredicted RBP11.54□□□□□ -0.56
SNX1-213ENST00000561026 IFNA21P01568 189 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 RRN3P1Q2M238 152 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 IGFL4Q6B9Z1 124 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 CYP2G1PQ6ZSU1 146 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 IGF2BP2-AS1Q96M15 143 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 SHANK2-AS3Q9BTD1 123 aa11.54□□□□□ -0.56
SNX1-213ENST00000561026 SSSCA1O60232 199 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 HYPMO75409 117 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
SNX1-213ENST00000561026 OR4E1P0C645 316 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 CNN1P51911 297 aaKnown RBP11.53□□□□□ -0.56
SNX1-213ENST00000561026 PLP1P60201 277 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 RAP2BP61225 183 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
SNX1-213ENST00000561026 KIAA1109Q2LD37 5005 aa11.52□□□□□ -0.57
SNX1-213ENST00000561026 RPL7P18124 248 aaKnown RBP11.52□□□□□ -0.57
SNX1-213ENST00000561026 SELENOTP62341 195 aa11.52□□□□□ -0.57
SNX1-213ENST00000561026 FGL1Q08830 312 aa11.52□□□□□ -0.57
SNX1-213ENST00000561026 OR11H7Q8NGC8 314 aa11.52□□□□□ -0.57
SNX1-213ENST00000561026 KRTAP17-1Q9BYP8 105 aa11.52□□□□□ -0.57
SNX1-213ENST00000561026 M0R2Z0 102 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 CRXO43186 299 aaPredicted RBP11.51□□□□□ -0.57
SNX1-213ENST00000561026 CCNKO75909 580 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 OR5G3P0C626 314 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 LINC00869P0C866 280 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 HTN3P15516 51 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
SNX1-213ENST00000561026 DLK1P80370 383 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 SPINK13Q1W4C9 94 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 C4orf46Q504U0 113 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 SDHCQ99643 169 aaPredicted RBP11.51□□□□□ -0.57
SNX1-213ENST00000561026 NPVFQ9HCQ7 196 aa11.51□□□□□ -0.57
SNX1-213ENST00000561026 LINC00854A0A1B0GVQ3 168 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 FNDC10F2Z333 226 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 M0R2N4 97 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 METTL15P1P0C7V9 234 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 BTCP35070 178 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 RRAS2P62070 204 aaPredicted RBP11.5□□□□□ -0.57
SNX1-213ENST00000561026 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 UHRF2Q96PU4 802 aa11.5□□□□□ -0.57
SNX1-213ENST00000561026 FAT2Q9NYQ8 4349 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 CENPXA8MT69 81 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
SNX1-213ENST00000561026 K7EPK0 472 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 INSP01308 110 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 PRM2P04554 102 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 TAS2R30P59541 319 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 B2MP61769 119 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 DAD1P61803 113 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
SNX1-213ENST00000561026 LGALS9BQ3B8N2 356 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
SNX1-213ENST00000561026 A0A087X0K7 114 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 A0A1B0GVY2 172 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 RTL8CO15255 209 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 TSC22D2O75157 780 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 SCGB1D2O95969 90 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 CXCL3P19876 107 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 TEPPQ6URK8 271 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 PATE2Q6UY27 113 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 MITD1Q8WV92 249 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 ARL6Q9H0F7 186 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 MGAT4CQ9UBM8 478 aa11.48□□□□□ -0.57
SNX1-213ENST00000561026 TSPOP30536 169 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 SLC38A11Q08AI6 406 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 RNF212Q495C1 297 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 TMEM88Q6PEY1 159 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 ZBTB8BQ8NAP8 495 aaPredicted RBP11.47□□□□□ -0.57
SNX1-213ENST00000561026 OR8A1Q8NGG7 326 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 ARV1Q9H2C2 271 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 GSKIPQ9P0R6 139 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 RNF24Q9Y225 148 aa11.47□□□□□ -0.57
SNX1-213ENST00000561026 RCL1Q9Y2P8 373 aaKnown RBP11.47□□□□□ -0.57
SNX1-213ENST00000561026 TRAV12-2A0A075B6T6 113 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 PRSS29PA6NIE9 313 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 LYRM9A8MSI8 78 aa11.46□□□□□ -0.57
SNX1-213ENST00000561026 BOLA2-SMG1P6H3BVE0 249 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms