RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LYRM2Q9NU23 88 aaPredicted RBP7.91□□□□□ -1.14
TPM1-227ENST00000560970 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
TPM1-227ENST00000560970 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 DFFBO76075 338 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 NPPCP23582 126 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 TFPI2P48307 235 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 AKR1C1Q04828 323 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 EIF5AL1Q6IS14 154 aaKnown RBP7.9□□□□□ -1.14
TPM1-227ENST00000560970 TMEM182Q6ZP80 229 aaPredicted RBP7.9□□□□□ -1.14
TPM1-227ENST00000560970 BAP18Q8IXM2 172 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 GBGT1Q8N5D6 347 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.14
TPM1-227ENST00000560970 FAM24BQ8N5W8 94 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 GLMPQ8WWB7 406 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 RNF125Q96EQ8 232 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 SLC25A32Q9H2D1 315 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 FBXL17Q9UF56 701 aa7.9□□□□□ -1.14
TPM1-227ENST00000560970 TMA7Q9Y2S6 64 aaKnown RBP7.9□□□□□ -1.14
TPM1-227ENST00000560970 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 SMCO3A2RU48 225 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 FAM24AA6NFZ4 105 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 RPL35AP18077 110 aaKnown RBP7.89□□□□□ -1.15
TPM1-227ENST00000560970 S100A1P23297 94 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
TPM1-227ENST00000560970 CAV2P51636 162 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 LYZP61626 148 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 DLK1P80370 383 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 ZNF124Q15973 351 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 C16orf54Q6UWD8 224 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 TMEM144Q7Z5S9 345 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 LRRC20Q8TCA0 184 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 PHLDA1Q8WV24 401 aaPredicted RBP7.89□□□□□ -1.15
TPM1-227ENST00000560970 PBDC1Q9BVG4 233 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 KRTAP17-1Q9BYP8 105 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 MS4A6AQ9H2W1 248 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 RABAC1Q9UI14 185 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 VPS13DQ5THJ4 4388 aa7.89□□□□□ -1.15
TPM1-227ENST00000560970 IGSF23A1L1A6 192 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 NMBP08949 121 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 ZNF266Q14584 549 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 LGALS9CQ6DKI2 356 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 STX12Q86Y82 276 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 OR10P1Q8NGE3 313 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 ARV1Q9H2C2 271 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 C11orf68Q9H3H3 251 aaKnown RBP7.88□□□□□ -1.15
TPM1-227ENST00000560970 TMEM231Q9H6L2 316 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 MAP6D1Q9H9H5 199 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 MED9Q9NWA0 146 aa7.88□□□□□ -1.15
TPM1-227ENST00000560970 A0A1W2PS18 150 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 FNDC10F2Z333 226 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 BUB3O43684 328 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 CST7O76096 145 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 SLC38A11Q08AI6 406 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 RPL7L1Q6DKI1 246 aaKnown RBP7.87□□□□□ -1.15
TPM1-227ENST00000560970 CYP2G1PQ6ZSU1 146 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 APRG1Q8IVJ8 170 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 STXBP6Q8NFX7 210 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 DCANP1Q8TF63 244 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 GATAD1Q8WUU5 269 aa7.87□□□□□ -1.15
TPM1-227ENST00000560970 K7EQG2 157 aa7.86□□□□□ -1.15
TPM1-227ENST00000560970 SULT1A1P50225 295 aa7.86□□□□□ -1.15
TPM1-227ENST00000560970 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
TPM1-227ENST00000560970 NARS2Q96I59 477 aaKnown RBP7.86□□□□□ -1.15
TPM1-227ENST00000560970 SMIM3Q9BZL3 60 aa7.86□□□□□ -1.15
TPM1-227ENST00000560970 TRAV2A0A0B4J234 112 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 DNASE2O00115 360 aaPredicted RBP7.85□□□□□ -1.15
TPM1-227ENST00000560970 CD5P06127 495 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 FABP1P07148 127 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 LINC00869P0C866 280 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 DEFB131AP59861 70 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 HBG1P69891 147 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 HBG2P69892 147 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 NHLH2Q02577 135 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 SIGLEC15Q6ZMC9 328 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 BPIFCQ8NFQ6 507 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 RNF141Q8WVD5 230 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 GRAMD2BQ96HH9 432 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 MGST2Q99735 147 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 GGACTQ9BVM4 153 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 NPVFQ9HCQ7 196 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 DOK5Q9P104 306 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 PFDN2Q9UHV9 154 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 AGRNO00468 2067 aa7.85□□□□□ -1.15
TPM1-227ENST00000560970 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 H3BRN7 92 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 ZNF688P0C7X2 276 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 ORM2P19652 201 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 PAFAH1B2P68402 229 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 VWC2Q2TAL6 325 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 FAM74A1Q5RGS3 127 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 LEMD1Q68G75 181 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 TEPPQ6URK8 271 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 COMMD7Q86VX2 200 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
TPM1-227ENST00000560970 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms