RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SNRPCP09234 159 aaKnown RBP9.99□□□□□ -0.81
SNX1-211ENST00000560829 CNN1P51911 297 aaKnown RBP9.99□□□□□ -0.81
SNX1-211ENST00000560829 TPPP2P59282 170 aa9.99□□□□□ -0.81
SNX1-211ENST00000560829 PDE6HQ13956 83 aa9.99□□□□□ -0.81
SNX1-211ENST00000560829 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
SNX1-211ENST00000560829 KLF12Q9Y4X4 402 aa9.99□□□□□ -0.81
SNX1-211ENST00000560829 TRBV24-1A0A075B6N3 115 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 IGLV2-8P01709 118 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 SLC25A5P05141 298 aaKnown RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 PFN1P07737 140 aaKnown RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 RPL7P18124 248 aaKnown RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 RAB9AP51151 201 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 TEX38Q6PEX7 206 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 AURKAIP1Q9NWT8 199 aaPredicted RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 URGCP-MRPS24S4R325 110 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 IGHG4P01861 327 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 S100A9P06702 114 aaKnown RBP9.98□□□□□ -0.81
SNX1-211ENST00000560829 CXCL1P09341 107 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 TMEM183BQ1AE95 376 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 PYGO2Q9BRQ0 406 aa9.98□□□□□ -0.81
SNX1-211ENST00000560829 PDZD2O15018 2839 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 ZANQ9Y493 2812 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 CLPSL1A2RUU4 121 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 H3BTX0 84 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 HOXA3O43365 443 aaPredicted RBP9.97□□□□□ -0.81
SNX1-211ENST00000560829 GCGP01275 180 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 TCRAP04437 139 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 SRP14P37108 136 aaKnown RBP9.97□□□□□ -0.81
SNX1-211ENST00000560829 SIGLEC15Q6ZMC9 328 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 OR5B12Q96R08 314 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 IMMP2LQ96T52 175 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 PRSS22Q9GZN4 317 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 KLK15Q9H2R5 256 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 GNB4Q9HAV0 340 aa9.97□□□□□ -0.81
SNX1-211ENST00000560829 TGIF2-C20orf24A0A0A6YYL0 155 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 IGHV3-35A0A0C4DH35 117 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 SMAD7O15105 426 aaKnown RBP9.96□□□□□ -0.81
SNX1-211ENST00000560829 BUB3O43684 328 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 PF4V1P10720 104 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 GALR1P47211 349 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 GNG5P63218 68 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 KRTAP1-1Q07627 177 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 C1QL4Q86Z23 238 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 TMEM86BQ8N661 226 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 MLXQ9UH92 298 aa9.96□□□□□ -0.81
SNX1-211ENST00000560829 ISLRO14498 428 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 S100PP25815 95 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 PSMB8P28062 276 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 ARL3P36405 182 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
SNX1-211ENST00000560829 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 C17orf77Q96MU5 243 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 U3KQE9 123 aa9.96□□□□□ -0.82
SNX1-211ENST00000560829 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 PPP5D1E7EU14 171 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 CD5LO43866 347 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 GGCTO75223 188 aaKnown RBP9.95□□□□□ -0.82
SNX1-211ENST00000560829 ZNF253O75346 499 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 HNF1AP20823 631 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 FAM209BQ5JX69 171 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 OR8I2Q8N0Y5 310 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 EXOC3-AS1Q8N2X6 119 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 FMC1Q96HJ9 113 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 FAM210BQ96KR6 192 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 GPR82Q96P67 336 aa9.95□□□□□ -0.82
SNX1-211ENST00000560829 A0A087X0K7 114 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 SLC17A3O00476 420 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 NDUFA4O00483 81 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 UBE2G1P62253 170 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 FOXL1Q12952 345 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 BAGE2Q86Y30 109 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 Q8N2B8 174 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 SIGLECL1Q8N7X8 197 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 OSTCQ9NRP0 149 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
SNX1-211ENST00000560829 TRAV34A0A0B4J273 112 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 RAB5BP61020 215 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 RPL15P61313 204 aaKnown RBP9.93□□□□□ -0.82
SNX1-211ENST00000560829 PSG9Q00887 426 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 OR5I1Q13606 314 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 KCNIP4Q6PIL6 250 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 METTL26Q96S19 204 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 CSPG4Q6UVK1 2322 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms