RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 WI2-2373I1.2A0A1W2PRP0 233 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 CHEK1O14757 476 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 TSPAN4O14817 238 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 GP9P14770 177 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 PLP1P60201 277 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 C10orf113Q5VZT2 155 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 S100A7AQ86SG5 101 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 PCNPQ8WW12 178 aaKnown RBP8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 SAT2Q96F10 170 aaPredicted RBP8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 NARS2Q96I59 477 aaKnown RBP8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 RHPN1-AS1Q9BWJ2 59 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 SLC25A22Q9H936 323 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 MLXQ9UH92 298 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
SNRPCP18-201ENST00000560619 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 ZNF785A8K8V0 405 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 A8MZ25 164 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 FHITP49789 147 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 CMC4P56277 68 aaPredicted RBP8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 RPP25LQ8N5L8 163 aaKnown RBP8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 SPAG8Q99932 426 aaPredicted RBP8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 RABAC1Q9UI14 185 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 RNF24Q9Y225 148 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
SNRPCP18-201ENST00000560619 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 HBE1P02100 147 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 NMBP08949 121 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 TAS2R45P59539 299 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 C1orf194Q5T5A4 169 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 FAM90A2PQ658T7 463 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 LCN15Q6UWW0 184 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 RBPMS2Q6ZRY4 209 aaKnown RBP8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 LINC00305Q7Z4B0 112 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 GTSCR1Q86UQ5 136 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 SFT2D1Q8WV19 159 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 TMEM37Q8WXS4 190 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 RAB24Q969Q5 203 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
SNRPCP18-201ENST00000560619 IGHV3OR16-8A0A075B7F1 116 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 A0A1B0GV50 99 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 HELTA6NFD8 242 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 K7EIL1 84 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 BUB3O43684 328 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 USF2Q15853 346 aaPredicted RBP8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 SPATA31B1PQ5VZV4 182 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 MIR17HGQ75NE6 70 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 TMEM61Q8N0U2 210 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 UHRF2Q96PU4 802 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 SEPSECSQ9HD40 501 aaKnown RBP8.38□□□□□ -1.07
SNRPCP18-201ENST00000560619 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 IZUMO1RA6ND01 250 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 OR4C46A6NHA9 309 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 ZNF207O43670 478 aaKnown RBP8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 EDN2P20800 178 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 FGF8P55075 233 aaPredicted RBP8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 KHDC3LQ587J8 217 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 Q8N1Y9 231 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 MBD3L1Q8WWY6 194 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 SLC25A39Q9BZJ4 359 aaPredicted RBP8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
SNRPCP18-201ENST00000560619 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 H3BRN7 92 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 OR7C2O60412 319 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 CXorf1O96002 111 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 STAG3L2P0CL84 134 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 STAG3L3P0CL85 134 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 MORN5Q5VZ52 161 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 MRAPQ8TCY5 172 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 GPR82Q96P67 336 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 PRR25Q96S07 402 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
SNRPCP18-201ENST00000560619 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 ZNF98A6NK75 572 aa8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 ARL14EPLP0DKL9 152 aa8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 GUCA2BQ16661 112 aa8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 SAMD13Q5VXD3 122 aa8.35□□□□□ -1.07
SNRPCP18-201ENST00000560619 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms