RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GGCTO75223 188 aaKnown RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 OR5G3P0C626 314 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 PYYP10082 97 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 FCGR2BP31994 310 aaPredicted RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 CDX1P47902 265 aaPredicted RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 RPL29P47914 159 aaKnown RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 FGF8P55075 233 aaPredicted RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 YPEL3P61236 119 aaPredicted RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 FHL3Q13643 280 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 TEX261Q6UWH6 196 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 LCN15Q6UWW0 184 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 C12orf54Q6X4T0 127 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 ADAMTSL5Q6ZMM2 481 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 ZNF600Q6ZNG1 722 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 Q6ZRG5 221 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 ZNF709Q8N972 641 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 OR10G4Q8NGN3 311 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 OR10G9Q8NGN4 311 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 OR10G7Q8NGN6 311 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 GATAD1Q8WUU5 269 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 TMEM190Q8WZ59 177 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 RNF125Q96EQ8 232 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 TXN2Q99757 166 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 SLC25A2Q9BXI2 301 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 SEPSECSQ9HD40 501 aaKnown RBP3.96□□□□□ -1.78
SPG11-220ENST00000559933 RPRMQ9NS64 109 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 IGKV3-7A0A075B6H7 116 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 TMEM213A2RRL7 107 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 H3BRN7 92 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 NDUFA4O00483 81 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 MPDU1O75352 247 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 OR10J4P0C629 311 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 SEC11BP0C7V7 166 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 CDC34P49427 236 aaPredicted RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 CCL20P78556 96 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 RELQ04864 619 aaPredicted RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 TMEM41BQ5BJD5 291 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 AKR1C8PQ5T2L2 129 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 FAM78BQ5VT40 261 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 C10orf113Q5VZT2 155 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 SPSB3Q6PJ21 355 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 IL34Q6ZMJ4 242 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 LINC00305Q7Z4B0 112 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 NDUFA11Q86Y39 141 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 RPP25LQ8N5L8 163 aaKnown RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 ZNF680Q8NEM1 530 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 Q8WTZ3 238 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 TMEM158Q8WZ71 300 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 DPF1Q92782 380 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 GNPNAT1Q96EK6 184 aaPredicted RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 C17orf77Q96MU5 243 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 PSMG3Q9BT73 122 aaPredicted RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 SLC25A39Q9BZJ4 359 aaPredicted RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 MRPL27Q9P0M9 148 aaKnown RBP3.95□□□□□ -1.78
SPG11-220ENST00000559933 HIGD1AQ9Y241 93 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 TIMM9Q9Y5J7 89 aa3.95□□□□□ -1.78
SPG11-220ENST00000559933 TRAV30A0A087WSZ9 112 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 A0A1B0GUS0 222 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 IZUMO1RA6ND01 250 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 C2orf70A6NJV1 201 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 ZNF705EA8MWA4 302 aaPredicted RBP3.94□□□□□ -1.78
SPG11-220ENST00000559933 HYPMO75409 117 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 CSN3P07498 182 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 ARL14EPLP0DKL9 152 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 M6PRP20645 277 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 C4BPBP20851 252 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 HLA-DMBP28068 263 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 SULT1A2P50226 295 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 SELENOTP62341 195 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 RAB31Q13636 194 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 KLF5Q13887 457 aaPredicted RBP3.94□□□□□ -1.78
SPG11-220ENST00000559933 ACOT6Q3I5F7 207 aaPredicted RBP3.94□□□□□ -1.78
SPG11-220ENST00000559933 FAM209BQ5JX69 171 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 PXDC1Q5TGL8 231 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 IQCF2Q8IXL9 164 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 C3orf56Q8N813 242 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 RAB24Q969Q5 203 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 FAM167A-AS1Q96KT0 104 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 RNF2Q99496 336 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 MLXQ9UH92 298 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 UBQLN2Q9UHD9 624 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 RABAC1Q9UI14 185 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 FUT9Q9Y231 359 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 SMAD5-AS1Q9Y6J3 95 aa3.94□□□□□ -1.78
SPG11-220ENST00000559933 IGHV7-4-1A0A0J9YVY3 117 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 ZNF98A6NK75 572 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 A8MWP6 167 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SEC14L6B5MCN3 397 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 H3BQ15 152 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SLC17A3O00476 420 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 OVOL1O14753 267 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 CHEK1O14757 476 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 MRPS12O15235 138 aaKnown RBP3.93□□□□□ -1.78
SPG11-220ENST00000559933 OR7C2O60412 319 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SAP30O75446 220 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 SCGB2A1O75556 95 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 FABP1P07148 127 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 NMBP08949 121 aa3.93□□□□□ -1.78
SPG11-220ENST00000559933 GP9P14770 177 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms