RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 PPP1R14BQ96C90 147 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 IGF2BP2-AS1Q96M15 143 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 CIB3Q96Q77 187 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 RPRMQ9NS64 109 aa13.27□□□□□ -0.29
CDC42BPB-206ENST00000559790 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 M0R2Z0 102 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 BTCP35070 178 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 GALR1P47211 349 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 EBLN2Q6P2I7 272 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 C16orf92Q96LL3 132 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 SDHCQ99643 169 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 GOLT1BQ9Y3E0 138 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 HSPG2P98160 4391 aa13.26□□□□□ -0.29
CDC42BPB-206ENST00000559790 IGLV2-18A0A075B6J9 118 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 C9orf170A2RU37 121 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 MRPS12O15235 138 aaKnown RBP13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 CFDP00746 253 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 HBE1P02100 147 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 ORM2P19652 201 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 SPINK13Q1W4C9 94 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 SAMD13Q5VXD3 122 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 BPIFCQ8NFQ6 507 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 SHANK2-AS3Q9BTD1 123 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 SLC25A39Q9BZJ4 359 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 FLVCR2Q9UPI3 526 aa13.25□□□□□ -0.29
CDC42BPB-206ENST00000559790 NOL3O60936 208 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 PRB4P10163 310 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 PLP1P60201 277 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 AKR1C1Q04828 323 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 BAK1Q16611 211 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 CYP2G1PQ6ZSU1 146 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 UHRF2Q96PU4 802 aa13.24□□□□□ -0.29
CDC42BPB-206ENST00000559790 ZNF705GA8MUZ8 300 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 NDUFB6O95139 128 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 HTN3P15516 51 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 RRN3P1Q2M238 152 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 PATE2Q6UY27 113 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 GPR82Q96P67 336 aa13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-206ENST00000559790 A0A087X0K7 114 aa13.22□□□□□ -0.29
CDC42BPB-206ENST00000559790 AZU1P20160 251 aa13.22□□□□□ -0.29
CDC42BPB-206ENST00000559790 TMEM147Q9BVK8 224 aa13.22□□□□□ -0.29
CDC42BPB-206ENST00000559790 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
CDC42BPB-206ENST00000559790 K7EPK0 472 aa13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 SSSCA1O60232 199 aa13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 LINC00869P0C866 280 aa13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 CXCL3P19876 107 aa13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 C7orf50Q9BRJ6 194 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-206ENST00000559790 TRAV12-2A0A075B6T6 113 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 INSP01308 110 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 TSPOP30536 169 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 DAD1P61803 113 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 DLK1P80370 383 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 RNF212Q495C1 297 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 SMIM8Q96KF7 97 aa13.2□□□□□ -0.3
CDC42BPB-206ENST00000559790 BOLA2-SMG1P6H3BVE0 249 aa13.19□□□□□ -0.3
CDC42BPB-206ENST00000559790 PSENENQ9NZ42 101 aa13.19□□□□□ -0.3
CDC42BPB-206ENST00000559790 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
CDC42BPB-206ENST00000559790 LRP1BQ9NZR2 4599 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 IL5P05113 134 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 OR4E1P0C645 316 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 MED14OSP0DP75 135 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 ANXA7P20073 488 aaKnown RBP13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 RRAS2P62070 204 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 SLC38A11Q08AI6 406 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 MORN5Q5VZ52 161 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 ZNF575Q86XF7 245 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 UBE2DNLQ8IWF7 75 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CDC42BPB-206ENST00000559790 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 DUSP14O95147 198 aaKnown RBP13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 S100A5P33763 92 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 FCN2Q15485 313 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 KRTAP4-5Q9BYR2 181 aa13.17□□□□□ -0.3
CDC42BPB-206ENST00000559790 HYPMO75409 117 aa13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 IFNA21P01568 189 aa13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 HIST1H1AQ02539 215 aaPredicted RBP13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 FGL1Q08830 312 aa13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 PSG3Q16557 428 aa13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 TMEM208Q9BTX3 173 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms