RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MYOD1P15172 320 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
CARMIL3-202ENST00000559694 TCRBV4S1A1TA0A5B7 111 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 MIR17HGQ75NE6 70 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM116Q8NCL8 245 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 CACNG8Q8WXS5 425 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 IGKV1-5P01602 117 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 HBBP68871 147 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 Q6ZRM9 215 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 DTX2Q86UW9 622 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 SIGLEC9Q9Y336 463 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 F11RQ9Y624 299 aaKnown RBP8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 RNF5Q99942 180 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 SSBP4Q9BWG4 385 aaPredicted RBP8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 HSPB7Q9UBY9 170 aa8.62□□□□□ -1.03
CARMIL3-202ENST00000559694 PSMB11A5LHX3 300 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 WDR83OSQ9Y284 106 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 LHBP01229 141 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 ORM1P02763 201 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM249Q2WGJ8 235 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 OR10AG1Q8NH19 301 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 C20orf144Q9BQM9 153 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 SMIM17P0DL12 118 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM167AQ8TBQ9 72 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 C10orf105Q8TEF2 133 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 IZUMO1RA6ND01 250 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 CA1P00915 261 aaPredicted RBP8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 NCOR1P1Q9H4R4 102 aa8.61□□□□□ -1.03
CARMIL3-202ENST00000559694 POLQO75417 2590 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 A0A1B0GWJ7 208 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 LINC00305Q7Z4B0 112 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 MRPL52Q86TS9 123 aaKnown RBP8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 C19orf24Q9BVV8 132 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 Q1RN00 199 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM14EPQ6UXP3 125 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 SCGB1D4Q6XE38 83 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 SELENOKQ9Y6D0 94 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 ZNF134P52741 427 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 CDSNQ15517 529 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 Q8NFD4 153 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 OSTCQ9NRP0 149 aa8.6□□□□□ -1.03
CARMIL3-202ENST00000559694 IGHV3OR16-12A0A075B7B8 117 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 C15orf65H3BRN8 121 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 J3QLI3 93 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 ITGB1BP1O14713 200 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 GPX1P07203 203 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 F5H697 171 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 RAB9AP51151 201 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 ZNF841Q6ZN19 808 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 H3BUT2 72 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 CD69Q07108 199 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 DIAPH2-AS1Q14236 149 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 NUDT11Q96G61 164 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 ZNF257Q9Y2Q1 563 aa8.59□□□□□ -1.03
CARMIL3-202ENST00000559694 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 FNDC4Q9H6D8 234 aaPredicted RBP8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 TSPOP30536 169 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 CKS2P33552 79 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 PAX9P55771 341 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 ZNF726P1Q15940 193 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 ZNF585BQ52M93 769 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 Q6ZSR3 168 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 CNTFRP26992 372 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 LYPD6Q86Y78 171 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 MPV17L2Q567V2 206 aa8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 MRPL32Q9BYC8 188 aaKnown RBP8.58□□□□□ -1.04
CARMIL3-202ENST00000559694 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 PEX7O00628 323 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 AREGP15514 252 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 LYRM7Q5U5X0 104 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 OR52E5Q8NH55 327 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 SPCS1Q9Y6A9 102 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 NBEAP1P0C6P0 100 aa8.57□□□□□ -1.04
CARMIL3-202ENST00000559694 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms