RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TRBV7-1A0A0A6YYK4 115 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 OR2T8A6NH00 312 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 PDE6DO43924 150 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 KHDC1LQ5JSQ8 128 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 ZNF343Q6P1L6 599 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 STXBP6Q8NFX7 210 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 RNF125Q96EQ8 232 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 CCDC140Q96MF4 163 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 CHRDL1Q9BU40 450 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 PAXXQ9BUH6 204 aa12.73□□□□□ -0.37
TPM1-219ENST00000559397 NPPCP23582 126 aa12.72□□□□□ -0.37
TPM1-219ENST00000559397 CEBPGP53567 150 aa12.72□□□□□ -0.37
TPM1-219ENST00000559397 KRTAP21-3Q3LHN1 58 aa12.72□□□□□ -0.37
TPM1-219ENST00000559397 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
TPM1-219ENST00000559397 SLC25A39Q9BZJ4 359 aaPredicted RBP12.72□□□□□ -0.37
TPM1-219ENST00000559397 OR51M1Q9H341 326 aa12.72□□□□□ -0.37
TPM1-219ENST00000559397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.71□□□□□ -0.37
TPM1-219ENST00000559397 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 F6UZH7 168 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 H3BQ15 152 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.37
TPM1-219ENST00000559397 LGALS1P09382 135 aaKnown RBP12.71□□□□□ -0.37
TPM1-219ENST00000559397 OR10J4P0C629 311 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 NDUFA11Q86Y39 141 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 C4orf3Q8WVX3 66 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 SHANK2-AS3Q9BTD1 123 aa12.71□□□□□ -0.37
TPM1-219ENST00000559397 H3BRN7 92 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 IL4P05112 153 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 CLEC3BP05452 202 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 PYYP10082 97 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 GPR183P32249 361 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
TPM1-219ENST00000559397 FAM74A3Q4VXF1 159 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 KLHL30-AS1Q8NEE0 82 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 NIPSNAP3BQ9BS92 247 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 PUS1Q9Y606 427 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM1-219ENST00000559397 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 TRBV12-3P01733 135 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 GP9P14770 177 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
TPM1-219ENST00000559397 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
TPM1-219ENST00000559397 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 BTN1A1Q13410 526 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 C8orf86Q6ZUL3 223 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 TVP23CQ96ET8 276 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 PARLQ9H300 379 aa12.69□□□□□ -0.38
TPM1-219ENST00000559397 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
TPM1-219ENST00000559397 ZNF727A8MUV8 499 aa12.68□□□□□ -0.38
TPM1-219ENST00000559397 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
TPM1-219ENST00000559397 TGOLN2O43493 480 aa12.68□□□□□ -0.38
TPM1-219ENST00000559397 SHISA2Q6UWI4 295 aa12.68□□□□□ -0.38
TPM1-219ENST00000559397 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
TPM1-219ENST00000559397 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
TPM1-219ENST00000559397 DNHD1Q96M86 4753 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 M0R036 132 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 RHEBQ15382 184 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 DEFB136Q30KP8 78 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 FAM209BQ5JX69 171 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 ZFAND3Q9H8U3 227 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 SDF2L1Q9HCN8 221 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 PPP5D1E7EU14 171 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 PNRC1Q12796 327 aaPredicted RBP12.67□□□□□ -0.38
TPM1-219ENST00000559397 TOMM20LQ6UXN7 152 aa12.67□□□□□ -0.38
TPM1-219ENST00000559397 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 A0A087WW49 117 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 BMPR1BO00238 502 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 NDUFB4O95168 129 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 MYCNOSP40205 109 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 TMEM241Q24JQ0 296 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 OR11H1Q8NG94 326 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 RAX2Q96IS3 184 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
TPM1-219ENST00000559397 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
TPM1-219ENST00000559397 HIST1H1EP10412 219 aaKnown RBP12.65□□□□□ -0.38
TPM1-219ENST00000559397 FHL3Q13643 280 aa12.65□□□□□ -0.38
TPM1-219ENST00000559397 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
TPM1-219ENST00000559397 OR1N2Q8NGR9 330 aa12.65□□□□□ -0.38
TPM1-219ENST00000559397 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
TPM1-219ENST00000559397 ARL3P36405 182 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
TPM1-219ENST00000559397 RELQ04864 619 aaPredicted RBP12.64□□□□□ -0.39
TPM1-219ENST00000559397 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 ELOVL1Q9BW60 279 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 RABAC1Q9UI14 185 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms