RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 ZNF266Q14584 549 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 CD300EQ496F6 205 aaPredicted RBP4.46□□□□□ -1.7
SHC4-206ENST00000559289 C4orf48Q5BLP8 95 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 PXDC1Q5TGL8 231 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 LEMD1Q68G75 181 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 OR2G3Q8NGZ4 309 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 SCGB1C1Q8TD33 95 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 METTL26Q96S19 204 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 PSMG3Q9BT73 122 aaPredicted RBP4.46□□□□□ -1.7
SHC4-206ENST00000559289 MCRIP2Q9BUT9 160 aaKnown RBP4.46□□□□□ -1.7
SHC4-206ENST00000559289 SCRT1Q9BWW7 348 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 SLC25A39Q9BZJ4 359 aaPredicted RBP4.46□□□□□ -1.7
SHC4-206ENST00000559289 SLC25A32Q9H2D1 315 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 DNAJC4Q9NNZ3 241 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 TECRQ9NZ01 308 aaKnown RBP4.46□□□□□ -1.7
SHC4-206ENST00000559289 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
SHC4-206ENST00000559289 ELOA3CA0A087WX78 387 aaPredicted RBP4.45□□□□□ -1.7
SHC4-206ENST00000559289 BORCS7-ASMTA0A0B4J1R7 106 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 TRAV5A0A0B4J249 113 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 KANTRA0A1W2PQU2 76 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 EREGO14944 169 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 EIF3GO75821 320 aaKnown RBP eCLIP4.45□□□□□ -1.7
SHC4-206ENST00000559289 JTBO76095 146 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 FFAR4Q5NUL3 377 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
SHC4-206ENST00000559289 SPATA31B1PQ5VZV4 182 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 Q6ZRG5 221 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 TCF24Q7RTU0 167 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 LINC00305Q7Z4B0 112 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 OR2K2Q8NGT1 345 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 STOML3Q8TAV4 291 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 ZNF503Q96F45 646 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 ZNF471Q9BX82 626 aaPredicted RBP4.45□□□□□ -1.7
SHC4-206ENST00000559289 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
SHC4-206ENST00000559289 HIGD1AQ9Y241 93 aa4.45□□□□□ -1.7
SHC4-206ENST00000559289 ZNF256Q9Y2P7 627 aaPredicted RBP4.45□□□□□ -1.7
SHC4-206ENST00000559289 A0A1W2PS18 150 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 C17orf112F2Z3M2 114 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 TSPAN4O14817 238 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 COX7A2P2O60397 106 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 M6PRP20645 277 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 RAB2AP61019 212 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 SERF2P84101 59 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 PMS2P11Q13670 270 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 ZNF726P1Q15940 193 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 C1orf194Q5T5A4 169 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 FAM78BQ5VT40 261 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 C10orf113Q5VZT2 155 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 MIR17HGQ75NE6 70 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 SSX7Q7RTT5 188 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 BAP18Q8IXM2 172 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 RPP25LQ8N5L8 163 aaKnown RBP4.44□□□□□ -1.7
SHC4-206ENST00000559289 FAM24BQ8N5W8 94 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 ZNF709Q8N972 641 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 OR1L4Q8NGR5 311 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 DYNLRB2Q8TF09 96 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 DCANP1Q8TF63 244 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 GATAD1Q8WUU5 269 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 PFDN5Q99471 154 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 SLC25A2Q9BXI2 301 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 SLC25A22Q9H936 323 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 KCNIP2Q9NS61 270 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 RPRMQ9NS64 109 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 C19orf73Q9NVV2 129 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 PRELID1Q9Y255 219 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
SHC4-206ENST00000559289 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 TRAV25A0A0B4J276 109 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 K7EQG2 157 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 SOCS3O14543 225 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 CD7P09564 240 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 SEC11BP0C7V7 166 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 IGLC2P0DOY2 106 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
SHC4-206ENST00000559289 GP9P14770 177 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 ACOT6Q3I5F7 207 aaPredicted RBP4.43□□□□□ -1.7
SHC4-206ENST00000559289 TMEM41BQ5BJD5 291 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 LCN12Q6JVE5 192 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 PET117Q6UWS5 81 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 SIGLEC15Q6ZMC9 328 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 SLC51BQ86UW2 128 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 OR8I2Q8N0Y5 310 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 Q8N1Y9 231 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 GBGT1Q8N5D6 347 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 OR10G4Q8NGN3 311 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 OR10G9Q8NGN4 311 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 OR10G7Q8NGN6 311 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 GNPNAT1Q96EK6 184 aaPredicted RBP4.43□□□□□ -1.7
SHC4-206ENST00000559289 GPR61Q9BZJ8 451 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 MS4A6AQ9H2W1 248 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 TMEM231Q9H6L2 316 aa4.43□□□□□ -1.7
SHC4-206ENST00000559289 FUT9Q9Y231 359 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms