RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF345Q14585 488 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 LGALSLQ3ZCW2 172 aaPredicted RBP8.08□□□□□ -1.12
TPM1-217ENST00000559108 C10orf113Q5VZT2 155 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 LAMTOR1Q6IAA8 161 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 AKAP14Q86UN6 197 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 APRG1Q8IVJ8 170 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 INO80EQ8NBZ0 244 aaPredicted RBP8.08□□□□□ -1.12
TPM1-217ENST00000559108 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 ZNF503Q96F45 646 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 SLC25A2Q9BXI2 301 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 TMEM231Q9H6L2 316 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 TENM3Q9P273 2699 aa8.08□□□□□ -1.12
TPM1-217ENST00000559108 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
TPM1-217ENST00000559108 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
TPM1-217ENST00000559108 HELTA6NFD8 242 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 SLC17A3O00476 420 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 C1QBP02746 253 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
TPM1-217ENST00000559108 FRMD6-AS1P0C7T7 363 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 IGLC2P0DOY2 106 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 HLA-DMBP28068 263 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 RAB31Q13636 194 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 C1orf194Q5T5A4 169 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 PXDC1Q5TGL8 231 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 LINC00322Q6ZN03 302 aaPredicted RBP8.07□□□□□ -1.12
TPM1-217ENST00000559108 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 OR8I2Q8N0Y5 310 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 GRAMD2BQ96HH9 432 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 DNAJC4Q9NNZ3 241 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
TPM1-217ENST00000559108 TRAV2A0A0B4J234 112 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 OR4C46A6NHA9 309 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 OR11H12B2RN74 326 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 IFNA5P01569 189 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 PYYP10082 97 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 BMI1P35226 326 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 NUP62P37198 522 aaPredicted RBP8.06□□□□□ -1.12
TPM1-217ENST00000559108 DEFB131AP59861 70 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 GDF5OSQ5U4N7 250 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 C9orf62Q8N4C0 152 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 SCGB1C1Q8TD33 95 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
TPM1-217ENST00000559108 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
TPM1-217ENST00000559108 ELOA3CA0A087WX78 387 aaPredicted RBP8.05□□□□□ -1.12
TPM1-217ENST00000559108 KNCNA6PVL3 124 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 BCL2L11O43521 198 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 NKX2-5P52952 324 aaPredicted RBP8.05□□□□□ -1.12
TPM1-217ENST00000559108 ZNF266Q14584 549 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 ZNF726P1Q15940 193 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 DEFB121Q5J5C9 76 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 FAM78BQ5VT40 261 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 Q6ZRG5 221 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 TMUB2Q71RG4 321 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 RNF182Q8N6D2 247 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 OR2G3Q8NGZ4 309 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 GATAD1Q8WUU5 269 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
TPM1-217ENST00000559108 SRD5A3Q9H8P0 318 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 ZNF586Q9NXT0 402 aa8.05□□□□□ -1.12
TPM1-217ENST00000559108 A0A087X0K7 114 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 A8MZ25 164 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 F6UB75 175 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 DNASE2O00115 360 aaPredicted RBP8.04□□□□□ -1.12
TPM1-217ENST00000559108 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
TPM1-217ENST00000559108 NDUFB4O95168 129 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 PSMG4Q5JS54 123 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 RPP25LQ8N5L8 163 aaKnown RBP8.04□□□□□ -1.12
TPM1-217ENST00000559108 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 OR1L4Q8NGR5 311 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 PFDN5Q99471 154 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 ASCL2Q99929 193 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 ARPC5LQ9BPX5 153 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 RPRMQ9NS64 109 aa8.04□□□□□ -1.12
TPM1-217ENST00000559108 ZMAT5Q9UDW3 170 aaKnown RBP8.04□□□□□ -1.12
TPM1-217ENST00000559108 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
TPM1-217ENST00000559108 C17orf112F2Z3M2 114 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 CD5P06127 495 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 RPL7P18124 248 aaKnown RBP8.03□□□□□ -1.12
TPM1-217ENST00000559108 GALR1P47211 349 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 FAM122CQ6P4D5 195 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 SAT2Q96F10 170 aaPredicted RBP8.03□□□□□ -1.12
TPM1-217ENST00000559108 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 RETNQ9HD89 108 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 KCNIP2Q9NS61 270 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 BOLA1Q9Y3E2 137 aa8.03□□□□□ -1.12
TPM1-217ENST00000559108 A0A0D9SG52 128 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 TAAR5O14804 337 aa8.02□□□□□ -1.13
TPM1-217ENST00000559108 GIG44P09565 113 aaPredicted RBP8.02□□□□□ -1.13
TPM1-217ENST00000559108 OR10J4P0C629 311 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms