RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 MLXQ9UH92 298 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 SELENOKQ9Y6D0 94 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 U3KQE9 123 aa5□□□□□ -1.61
CHRNA3-204ENST00000559002 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 TRAV25A0A0B4J276 109 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 A0A1W2PPV4 95 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 IGLV1-51P01701 117 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 SEC11BP0C7V7 166 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 SPP1P10451 314 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 RPL7P18124 248 aaKnown RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 ATF4P18848 351 aaPredicted RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 GALR1P47211 349 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 CDC34P49427 236 aaPredicted RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 TAS2R45P59539 299 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 PAFAH1B2P68402 229 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 GUCA2BQ16661 112 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 DEFB114Q30KQ6 69 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 CD300EQ496F6 205 aaPredicted RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 SPATA31B1PQ5VZV4 182 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 C16orf54Q6UWD8 224 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 SIGLEC15Q6ZMC9 328 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 BPIFA4PQ86YQ2 179 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 TMED6Q8WW62 240 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 GLMPQ8WWB7 406 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 ACTR3CQ9C0K3 210 aaPredicted RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 ZMAT5Q9UDW3 170 aaKnown RBP4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 FUT9Q9Y231 359 aa4.99□□□□□ -1.61
CHRNA3-204ENST00000559002 OR4C46A6NHA9 309 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 ZNF785A8K8V0 405 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 UMAD1C9J7I0 102 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 DNASE2O00115 360 aaPredicted RBP4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 OR7C2O60412 319 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 TFPI2P48307 235 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 KHDC3LQ587J8 217 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 OXLD1Q5BKU9 147 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 MIR17HGQ75NE6 70 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 TMEM61Q8N0U2 210 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 STXBP6Q8NFX7 210 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 SEPSECSQ9HD40 501 aaKnown RBP4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 RPRMQ9NS64 109 aa4.98□□□□□ -1.61
CHRNA3-204ENST00000559002 TRAV5A0A0B4J249 113 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 CTXND1A0A1B0GTU2 59 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 G3V4G9 280 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 TSPAN4O14817 238 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 WIPF1O43516 503 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 MEOX2P50222 304 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 RAB5CP51148 216 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 UBE2L3P68036 154 aaKnown RBP4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 SAMD5Q5TGI4 173 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 SAMD13Q5VXD3 122 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 FAM90A2PQ658T7 463 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 ALKAL2Q6UX46 152 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 DPPA3Q6W0C5 159 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 IQCF2Q8IXL9 164 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 GBGT1Q8N5D6 347 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 RPP25LQ8N5L8 163 aaKnown RBP4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 FAM213BQ8TBF2 198 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 LRRC20Q8TCA0 184 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 PHYHIPLQ96FC7 376 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 SPAG8Q99932 426 aaPredicted RBP4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 PAXXQ9BUH6 204 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 SLC25A2Q9BXI2 301 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 MS4A6AQ9H2W1 248 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 NRN1Q9NPD7 142 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 PLA2G2EQ9NZK7 142 aa4.97□□□□□ -1.61
CHRNA3-204ENST00000559002 MEGF8Q7Z7M0 2845 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 A0A087X0K7 114 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 TRAV2A0A0B4J234 112 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 MAP1LC3B2A6NCE7 125 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 IZUMO1RA6ND01 250 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 HMGB3O15347 200 aaKnown RBP4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 EIF3GO75821 320 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 STAG3L2P0CL84 134 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 STAG3L3P0CL85 134 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 PYYP10082 97 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 HIST1H1EP10412 219 aaKnown RBP4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 GP9P14770 177 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 ID1P41134 155 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 LCN15Q6UWW0 184 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 PQLC2Q6ZP29 291 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 GTSCR1Q86UQ5 136 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 RAB24Q969Q5 203 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 C16orf92Q96LL3 132 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 MAP1LC3BQ9GZQ8 125 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 OR51M1Q9H341 326 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 TMEM14CQ9P0S9 112 aa4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 ZNF256Q9Y2P7 627 aaPredicted RBP4.96□□□□□ -1.62
CHRNA3-204ENST00000559002 TEX46H3BTG2 121 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 H3BTX0 84 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 MRPS12O15235 138 aaKnown RBP4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 CXorf1O96002 111 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 IFNA7P01567 189 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 H2AFB1P0C5Y9 115 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 OR10J4P0C629 311 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 ARL14EPLP0DKL9 152 aa4.95□□□□□ -1.62
CHRNA3-204ENST00000559002 FHITP49789 147 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms