RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MIFP14174 115 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 AP2S1P53680 142 aaPredicted RBP5.29□□□□□ -1.56
SPG11-213ENST00000558988 NUTF2P61970 127 aaKnown RBP5.29□□□□□ -1.56
SPG11-213ENST00000558988 SRPXP78539 464 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 ZNF90Q03938 601 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 AARDQ4LEZ3 155 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 TMEM41BQ5BJD5 291 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 LGALS9CQ6DKI2 356 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 OR4B1Q8NGF8 309 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 SLC25A22Q9H936 323 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 RABL2AQ9UBK7 228 aaPredicted RBP5.29□□□□□ -1.56
SPG11-213ENST00000558988 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 CELA1Q9UNI1 258 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 RABL2BQ9UNT1 228 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 U3KQ87 197 aa5.29□□□□□ -1.56
SPG11-213ENST00000558988 TRAV10A0A0B4J240 114 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 SMCO3A2RU48 225 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 H3BP45 60 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 WRBO00258 174 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 BUB3O43684 328 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 FABP1P07148 127 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 HOXB5P09067 269 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 HTN3P15516 51 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 S100A5P33763 92 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 INPP1P49441 399 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 AP3S2P59780 193 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 RAB11AP62491 216 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 AKR1C1Q04828 323 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 GAMTQ14353 236 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 GDF5OSQ5U4N7 250 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 CCDC28AQ8IWP9 274 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 OR8I2Q8N0Y5 310 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 CACFD1Q9UGQ2 172 aa5.28□□□□□ -1.56
SPG11-213ENST00000558988 IGHV4-4A0A075B6R2 117 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 IGKV1D-37A0A075B6S9 117 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 DEFB131BA0A096LNP1 70 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 LOC102723971A0A1B0GUV8 181 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 SNRPGP15A8MWD9 76 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 C11orf94C9JXX5 98 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 F6UB75 175 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 H3BMM0 161 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 PRB4P10163 310 aaPredicted RBP5.27□□□□□ -1.57
SPG11-213ENST00000558988 NUP62P37198 522 aaPredicted RBP5.27□□□□□ -1.57
SPG11-213ENST00000558988 ID1P41134 155 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 FGL1Q08830 312 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 PPP1R1AQ13522 171 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 TMEM128Q5BJH2 165 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 SPANXN5Q5MJ07 72 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 BCL7BQ9BQE9 202 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 C7orf50Q9BRJ6 194 aaKnown RBP5.27□□□□□ -1.57
SPG11-213ENST00000558988 SCRT1Q9BWW7 348 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 C1QTNF4Q9BXJ3 329 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 SLC35B3Q9H1N7 401 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 DOK5Q9P104 306 aa5.27□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705EA8MWA4 302 aaPredicted RBP5.26□□□□□ -1.57
SPG11-213ENST00000558988 MED6O75586 246 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 SFT2D2O95562 160 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 HLA-DRB4P13762 266 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 ORM2P19652 201 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 GATA2P23769 480 aaPredicted RBP5.26□□□□□ -1.57
SPG11-213ENST00000558988 MT3P25713 68 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 GPX4P36969 197 aaPredicted RBP5.26□□□□□ -1.57
SPG11-213ENST00000558988 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 GGNBP1Q5YKI7 109 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 OR8G2PQ6IF36 304 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 EBLN2Q6P2I7 272 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 CSNK1G2-AS1Q8NCQ2 148 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 OR1B1Q8NGR6 318 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 HRH4Q9H3N8 390 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 APLNQ9ULZ1 77 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 V9GYH0 126 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 HLA-DRB4X5D2U9 266 aa5.26□□□□□ -1.57
SPG11-213ENST00000558988 DUXBA0A1W2PPF3 345 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 M0R2N4 97 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SYNGR2O43760 224 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SSSCA1O60232 199 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 ADAP1O75689 374 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705DP0CH99 300 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 ZNF705BP0CI00 300 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 NKX2-1P43699 371 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 PSMB3P49720 205 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 RRAS2P62070 204 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 RPP30P78346 268 aaKnown RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 ZNF79Q15937 498 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SPANXN2Q5MJ10 180 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 FAM78BQ5VT40 261 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 TRIQKQ629K1 86 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 ACOT7LQ6ZUV0 252 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 UBE2DNLQ8IWF7 75 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 CIB3Q96Q77 187 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 TRGV9Q99603 122 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SOSTQ9BQB4 213 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SLC25A21Q9BQT8 299 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 TMEM208Q9BTX3 173 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 RSG1Q9BU20 258 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 TMEM147Q9BVK8 224 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SLC25A32Q9H2D1 315 aa5.25□□□□□ -1.57
SPG11-213ENST00000558988 SAV1Q9H4B6 383 aaPredicted RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 STRAPQ9Y3F4 350 aaKnown RBP5.25□□□□□ -1.57
SPG11-213ENST00000558988 RYR2Q92736 4967 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms