RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 SLC45A2Q9UMX9 530 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.49
CDC42BPB-203ENST00000558867 TRAV25A0A0B4J276 109 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 SPRY2O43597 315 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 OR2J3O76001 311 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 YIF1AO95070 293 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 ARL3P36405 182 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 TAGLN2P37802 199 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 ELLP55199 621 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
CDC42BPB-203ENST00000558867 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 MAP1LC3B2A6NCE7 125 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 MFAP2P55001 183 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 SELENOTP62341 195 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 ZNF506Q5JVG8 444 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 TMEM61Q8N0U2 210 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 MAP1LC3BQ9GZQ8 125 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
CDC42BPB-203ENST00000558867 RBFOX3A6NFN3 312 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 LINC00869P0C866 280 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 B2MP61769 119 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 TM4SF20Q53R12 229 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 LGALS9CQ6DKI2 356 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 STPG3Q8N7X2 389 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 EEF1AKMT3Q96AZ1 226 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 TREM1Q9NP99 234 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 HERC2O95714 4834 aa11.93□□□□□ -0.5
CDC42BPB-203ENST00000558867 A8MWP6 167 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 REG1AP05451 166 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 PPT1P50897 306 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 CCL20P78556 96 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 MIC13Q5XKP0 118 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 RNF2Q99496 336 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 TRGV9Q99603 122 aa11.92□□□□□ -0.5
CDC42BPB-203ENST00000558867 TMEM213A2RRL7 107 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 I3L2K1 104 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 IFNA1P01562 189 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 OR10J1P30954 320 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 PSMB3P49720 205 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 RHOBP62745 196 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 FAM122CQ6P4D5 195 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 CYP2G1PQ6ZSU1 146 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 MLXQ9UH92 298 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
CDC42BPB-203ENST00000558867 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 IGKV1D-37A0A075B6S9 117 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 KIR2DL5BA0A0G2JN68 375 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 KIR2DL5BA0A0G2JPC4 375 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 LOC102723971A0A1B0GUV8 181 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 OR5G3P0C626 314 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 STAG3L2P0CL84 134 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 STAG3L3P0CL85 134 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 BCL2P10415 239 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 DEFA4P12838 97 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 ADCYAP1P18509 176 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 EDN2P20800 178 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 MLANAQ16655 118 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 DEFB135Q30KP9 77 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 KIR2DL5AQ8N109 375 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 NARS2Q96I59 477 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 SLC25A22Q9H936 323 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
CDC42BPB-203ENST00000558867 KMT2AQ03164 3969 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 MT-CO2P00403 227 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 RND2P52198 227 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 ICAM4Q14773 271 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 RNF183Q96D59 192 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 ACY3Q96HD9 319 aa11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 SPAG8Q99932 426 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPB-203ENST00000558867 MRPL32Q9BYC8 188 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms