RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	CAV2	P51636	162 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	NANOS2	P60321	138 aa	Known RBP	5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	BAX	Q07812	192 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	ODF1	Q14990	250 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	BSX	Q3C1V8	233 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	C2orf83	Q53S99	150 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	SPANXN5	Q5MJ07	72 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	ZNF546	Q86UE3	836 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	STX12	Q86Y82	276 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	RPP25L	Q8N5L8	163 aa	Known RBP	5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	TXN2	Q99757	166 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	CSTL1	Q9H114	145 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	MS4A6A	Q9H2W1	248 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	C11orf1	Q9H5F2	150 aa		5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.12	□□□□□ -1.59
MARK3-215	ENST00000558787	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	NUPR2	A6NF83	97 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787		G3V3Q6	166 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	SMLR1	H3BR10	107 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	DNASE2	O00115	360 aa	Predicted RBP	5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	C4BPB	P20851	252 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	RPL12	P30050	165 aa	Known RBP	5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	NPBWR1	P48145	328 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	SULT1A1	P50225	295 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	PAX9	P55771	341 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	DEFB131A	P59861	70 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	HBG1	P69891	147 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	HBG2	P69892	147 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	ZNF345	Q14585	488 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	KRTAP15-1	Q3LI76	137 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	TIGIT	Q495A1	244 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	GAGE13	Q4V321	117 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787		Q5BKY6	102 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	ETFRF1	Q6IPR1	90 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	TMEM14EP	Q6UXP3	125 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	ZNF600	Q6ZNG1	722 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	TMEM252	Q8N6L7	170 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	OR11H2	Q8NH07	326 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	AQP10	Q96PS8	301 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	RARRES2	Q99969	163 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	GGACT	Q9BVM4	153 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	VSIR	Q9H7M9	311 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	FBXL17	Q9UF56	701 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	RABAC1	Q9UI14	185 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	PAIP2B	Q9ULR5	123 aa	Known RBP	5.11	□□□□□ -1.59
MARK3-215	ENST00000558787	TNFSF18	Q9UNG2	199 aa		5.11	□□□□□ -1.59
MARK3-215	ENST00000558787		A0A0D9SG52	128 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	FAM24A	A6NFZ4	105 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	KNCN	A6PVL3	124 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787		H3BP45	60 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	AGRN	O00468	2067 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	CA1	P00915	261 aa	Predicted RBP	5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	IFNA4	P05014	189 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	METTL15P1	P0C7V9	234 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	S100A11	P31949	105 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	GPX4	P36969	197 aa	Predicted RBP	5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	OPRK1	P41145	380 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	PAFAH1B2	P68402	229 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	CD300C	Q08708	224 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	OR2F1	Q13607	317 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	ATP6V1F	Q16864	119 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	TOR2A	Q5JU69	321 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	PVRIG	Q6DKI7	326 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	ACOT7L	Q6ZUV0	252 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	OR11H4	Q8NGC9	324 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	OR10P1	Q8NGE3	313 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	GINS3	Q9BRX5	216 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	MFF	Q9GZY8	342 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	KLK5	Q9Y337	293 aa	Predicted RBP	5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	HSPB11	Q9Y547	144 aa		5.1	□□□□□ -1.59
MARK3-215	ENST00000558787	IGSF23	A1L1A6	192 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	RNF222	A6NCQ9	220 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	FNDC10	F2Z333	226 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	TAAR5	O14804	337 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	ARPC5	O15511	151 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	CLN5	O75503	358 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	SCGB2A1	O75556	95 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	CST7	O76096	145 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	IGKV1-17	P01599	117 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	GIG44	P09565	113 aa	Predicted RBP	5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	ZNF688	P0C7X2	276 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	NPPC	P23582	126 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	AP2S1	P53680	142 aa	Predicted RBP	5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	CMC4	P56277	68 aa	Predicted RBP	5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	DLK1	P80370	383 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	SLC38A11	Q08AI6	406 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	OR8G2P	Q6IF36	304 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	KCNRG	Q8N5I3	272 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	TMEM217	Q8N7C4	229 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	STXBP6	Q8NFX7	210 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	OR1S2	Q8NGQ3	325 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	C11orf45	Q8TAV5	145 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	TMEM170A	Q8WVE7	144 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	VPS13D	Q5THJ4	4388 aa		5.09	□□□□□ -1.59
MARK3-215	ENST00000558787	PMS2P5	A8MQ11	134 aa		5.08	□□□□□ -1.6
MARK3-215	ENST00000558787	PRSS46	E5RG02	174 aa		5.08	□□□□□ -1.6
MARK3-215	ENST00000558787		K7EQG2	157 aa		5.08	□□□□□ -1.6

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