RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TCTAP57738 103 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 GAGE5Q13069 117 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 GAGE6Q13070 117 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 TWIST1Q15672 202 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 MLANAQ16655 118 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 C12orf74Q32Q52 190 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 TMEM167AQ8TBQ9 72 aa12.94□□□□□ -0.34
HMBOX1-212ENST00000558662 TNRC18O15417 2968 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 IGKV1D-17A0A075B6S4 117 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 D6R8Y8 96 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 TM4SF5O14894 197 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 CELA3AP09093 270 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 MYOD1P15172 320 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 C1orf229Q6ZS94 237 aaPredicted RBP12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 LAMA3Q16787 3333 aa12.93□□□□□ -0.34
HMBOX1-212ENST00000558662 ODF1Q14990 250 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 MBNL2Q5VZF2 373 aaKnown RBP12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 SH2D6Q7Z4S9 175 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 CXorf67Q86X51 503 aaPredicted RBP12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 NXT2Q9NPJ8 142 aaKnown RBP12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 REV3LO60673 3130 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 WI2-2373I1.2A0A1W2PRP0 233 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 ZNF785A8K8V0 405 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 DPM2O94777 84 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 FCER1GP30273 86 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 CDIP1Q9H305 208 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 SELENOKQ9Y6D0 94 aa12.92□□□□□ -0.34
HMBOX1-212ENST00000558662 CDH23Q9H251 3354 aa12.91□□□□□ -0.34
HMBOX1-212ENST00000558662 LY6G6EA0A0G2JKS1 128 aa12.91□□□□□ -0.34
HMBOX1-212ENST00000558662 KLK10O43240 276 aa12.91□□□□□ -0.34
HMBOX1-212ENST00000558662 C18orf15Q96N68 181 aa12.91□□□□□ -0.34
HMBOX1-212ENST00000558662 U3KQA8 63 aa12.91□□□□□ -0.34
HMBOX1-212ENST00000558662 LOXL1Q08397 574 aaPredicted RBP12.9□□□□□ -0.34
HMBOX1-212ENST00000558662 Q6ZUT4 128 aa12.9□□□□□ -0.34
HMBOX1-212ENST00000558662 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
HMBOX1-212ENST00000558662 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
HMBOX1-212ENST00000558662 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 Q0VFX4 171 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 FAM106AQ4KMX7 169 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 SYT8Q8NBV8 401 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 MAP1LC3AQ9H492 121 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 IGHV3-64DA0A0J9YX35 117 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 K7ERJ3 54 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 ORM2P19652 201 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 COX8CQ7Z4L0 72 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 C1orf162Q8NEQ5 155 aaPredicted RBP12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 PPDPFLQ8WWR9 84 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
HMBOX1-212ENST00000558662 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 PLGLAQ15195 96 aa12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 TM4SF20Q53R12 229 aa12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 HARBI1Q96MB7 349 aa12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
HMBOX1-212ENST00000558662 LOC389332A0A1B0GUA5 103 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 CKS2P33552 79 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 SRSF2Q01130 221 aaKnown RBP12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 GOLT1AQ6ZVE7 132 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 FAM110AQ9BQ89 295 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 TMEM133Q9H2Q1 129 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 C12orf49Q9H741 205 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 ZNF71Q9NQZ8 489 aaPredicted RBP12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
HMBOX1-212ENST00000558662 K7EM74 188 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 TFF1P04155 84 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 IGKV1-16P04430 117 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 PRR31Q5SQ13 230 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 C20orf78Q9BR46 151 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 IGKV2D-26A0A0A0MRZ7 120 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 WT1-ASQ06250 92 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 C3AR1Q16581 482 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 ZFAND6Q6FIF0 208 aa12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 FLYWCH2Q96CP2 140 aaKnown RBP12.86□□□□□ -0.35
HMBOX1-212ENST00000558662 M0QXV9 152 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 PLAUP00749 431 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 PLNP26678 52 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 TMEM178AQ8NBL3 297 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 RAX2Q96IS3 184 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 SCNM1Q9BWG6 230 aa12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-212ENST00000558662 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 LHBP01229 141 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 PRSS1P07477 247 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 MAGEA5P43359 124 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms