RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TUBA4BQ9H853 241 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SRD5A3Q9H8P0 318 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 EDA2RQ9HAV5 297 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 SHPKQ9UHJ6 478 aa3.1□□□□□ -1.91
SPG11-211ENST00000558561 DYNC2H1Q8NCM8 4307 aaKnown RBP3.1□□□□□ -1.91
SPG11-211ENST00000558561 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
SPG11-211ENST00000558561 PLECQ15149 4684 aaKnown RBP3.1□□□□□ -1.91
SPG11-211ENST00000558561 STAB2Q8WWQ8 2551 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 FAM24AA6NFZ4 105 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 KNCNA6PVL3 124 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 K7EMT4 169 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 LYRM1O43325 122 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 IFNA10P01566 189 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 PRM2P04554 102 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 GIG44P09565 113 aaPredicted RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 NPY1RP25929 384 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 FCGR2BP31994 310 aaPredicted RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 OPRK1P41145 380 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 IL15RAQ13261 267 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 SPANXN5Q5MJ07 72 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 GFI1BQ5VTD9 330 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 TRIQKQ629K1 86 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 HSD17B13Q7Z5P4 300 aaPredicted RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 LYG2Q86SG7 212 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 LRTM2Q8N967 370 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 OR51G1Q8NGK1 321 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 OR4D5Q8NGN0 318 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 OR4X1Q8NH49 305 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 DTD1Q8TEA8 209 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 IL22RA2Q969J5 263 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 SCGB3A2Q96PL1 93 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 LYSTQ99698 3801 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 TXN2Q99757 166 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 SLC25A21Q9BQT8 299 aaPredicted RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 OVOL2Q9BRP0 275 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 MS4A6AQ9H2W1 248 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 C11orf1Q9H5F2 150 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 VSIRQ9H7M9 311 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 ENY2Q9NPA8 101 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 THYN1Q9P016 225 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 GSKIPQ9P0R6 139 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 RABL2AQ9UBK7 228 aaPredicted RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 PAIP2BQ9ULR5 123 aaKnown RBP3.09□□□□□ -1.91
SPG11-211ENST00000558561 RABL2BQ9UNT1 228 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 RFNGQ9Y644 331 aa3.09□□□□□ -1.91
SPG11-211ENST00000558561 RYR3Q15413 4870 aa3.09□□□□□ -1.92
SPG11-211ENST00000558561 DEFB4AO15263 64 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 SYNGR2O43760 224 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 EIF3GO75821 320 aaKnown RBP eCLIP3.08□□□□□ -1.92
SPG11-211ENST00000558561 IFNA4P05014 189 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 MT3P25713 68 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 CRYBB3P26998 211 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 HLA-DMBP28068 263 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 OR10J1P30954 320 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 HTR2BP41595 481 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 NPBWR1P48145 328 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 FXYD7P58549 80 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 DEFB131AP59861 70 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 RRAS2P62070 204 aaPredicted RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 GDF5OSQ5U4N7 250 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 THOC7Q6I9Y2 204 aaKnown RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 LCN12Q6JVE5 192 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 ZNF600Q6ZNG1 722 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 RBPMS2Q6ZRY4 209 aaKnown RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 NRARPQ7Z6K4 114 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 ZBTB8BQ8NAP8 495 aaPredicted RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 OR1L6Q8NGR2 347 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 SGK494Q96LW2 274 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 PDCD10Q9BUL8 212 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 C20orf85Q9H1P6 137 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 PALMDQ9NP74 551 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 SCRT2Q9NQ03 307 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 DAZ1Q9NQZ3 744 aaKnown RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 CLEC5AQ9NY25 188 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 MDFICQ9P1T7 246 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 RCL1Q9Y2P8 373 aaKnown RBP3.08□□□□□ -1.92
SPG11-211ENST00000558561 UFC1Q9Y3C8 167 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 SACSQ9NZJ4 4579 aa3.08□□□□□ -1.92
SPG11-211ENST00000558561 IGLV9-49A0A0B4J1Y8 123 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 TRAV5A0A0B4J249 113 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 TRAV25A0A0B4J276 109 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 C7orf66A4D0T2 115 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 NAP1L6A6NFF2 107 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 FAM25EA8MYX2 175 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 F6UB75 175 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 K7EQG2 157 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 SSSCA1O60232 199 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 B3GALNT1O75752 331 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 ATG12O94817 140 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 IL4P05112 153 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 METTL15P1P0C7V9 234 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 ZNF688P0C7X2 276 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 ZNF705DP0CH99 300 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 ZNF705BP0CI00 300 aaPredicted RBP3.07□□□□□ -1.92
SPG11-211ENST00000558561 RD3LP0DJH9 198 aa3.07□□□□□ -1.92
SPG11-211ENST00000558561 NPPCP23582 126 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms