RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ATP5SQ99766 215 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 WFDC1Q9HC57 220 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
LRRC28-206ENST00000558471 ELOA3CA0A087WX78 387 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-206ENST00000558471 G3V3Q6 166 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 SOCS3O14543 225 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 RPL35AP18077 110 aaKnown RBP9.23□□□□□ -0.93
LRRC28-206ENST00000558471 GALR1P47211 349 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 MORN5Q5VZ52 161 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 GPR82Q96P67 336 aa9.23□□□□□ -0.93
LRRC28-206ENST00000558471 SEPSECSQ9HD40 501 aaKnown RBP9.23□□□□□ -0.93
LRRC28-206ENST00000558471 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
LRRC28-206ENST00000558471 SNRPD3P62318 126 aaKnown RBP9.22□□□□□ -0.93
LRRC28-206ENST00000558471 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.22□□□□□ -0.93
LRRC28-206ENST00000558471 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
LRRC28-206ENST00000558471 AQP10Q96PS8 301 aa9.22□□□□□ -0.93
LRRC28-206ENST00000558471 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
LRRC28-206ENST00000558471 U3KQK5 164 aa9.22□□□□□ -0.93
LRRC28-206ENST00000558471 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 TRAV5A0A0B4J249 113 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 KNCNA6PVL3 124 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 MRPS12O15235 138 aaKnown RBP9.21□□□□□ -0.94
LRRC28-206ENST00000558471 IFNA5P01569 189 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 GCSAMLQ5JQS6 135 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 ZNF709Q8N972 641 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 SCGB1C1Q8TD33 95 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 LINC00052Q96N35 136 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 PFDN5Q99471 154 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 SPATA25Q9BR10 227 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 RNF24Q9Y225 148 aa9.21□□□□□ -0.94
LRRC28-206ENST00000558471 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 KIR2DL5BA0A0G2JN68 375 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 KIR2DL5BA0A0G2JPC4 375 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 ISLRO14498 428 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 ATF4P18848 351 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-206ENST00000558471 ID1P41134 155 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 PSMB3P49720 205 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 MEOX2P50222 304 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 APOC4P55056 127 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 ACTL10Q5JWF8 245 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 Q6ZNX1 250 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 KIR2DL5AQ8N109 375 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 RCHY1Q96PM5 261 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-206ENST00000558471 RETNQ9HD89 108 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
LRRC28-206ENST00000558471 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 A0A087X0K7 114 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
LRRC28-206ENST00000558471 DEFB1P60022 68 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 SAMD13Q5VXD3 122 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 IGFL4Q6B9Z1 124 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 STHQ8IWL8 128 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 INO80EQ8NBZ0 244 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-206ENST00000558471 C20orf173Q96LM9 149 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 KCNIP2Q9NS61 270 aa9.19□□□□□ -0.94
LRRC28-206ENST00000558471 FAM78BQ5VT40 261 aa9.18□□□□□ -0.94
LRRC28-206ENST00000558471 SPATA31B1PQ5VZV4 182 aa9.18□□□□□ -0.94
LRRC28-206ENST00000558471 TRPT1Q86TN4 253 aaKnown RBP9.18□□□□□ -0.94
LRRC28-206ENST00000558471 H3BMM0 161 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 H3BQ15 152 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 UBE2CO00762 179 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 ARPC5O15511 151 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 IGLC2P0DOY2 106 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 ZNF266Q14584 549 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 FFAR4Q5NUL3 377 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 Q6ZWC4 215 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 OVOL2Q9BRP0 275 aa9.17□□□□□ -0.94
LRRC28-206ENST00000558471 F6UB75 175 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 H3BTX0 84 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 DEFB135Q30KP9 77 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 HSD17B11Q8NBQ5 300 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 OR11H4Q8NGC9 324 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 LRRC20Q8TCA0 184 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 HRH4Q9H3N8 390 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 SAV1Q9H4B6 383 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-206ENST00000558471 RPRMQ9NS64 109 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 ZNF586Q9NXT0 402 aa9.16□□□□□ -0.94
LRRC28-206ENST00000558471 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms