RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 GUSBP1Q15486 140 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 COA6Q5JTJ3 125 aaKnown RBP12.44□□□□□ -0.42
AP4E1-202ENST00000558439 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 VKORC1Q9BQB6 163 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 C2orf88Q9BSF0 95 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
AP4E1-202ENST00000558439 NMUP48645 174 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 RAXQ9Y2V3 346 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 ARPC1AQ92747 370 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 TRGV9Q99603 122 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 NCOR1P1Q9H4R4 102 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 TMEM249Q2WGJ8 235 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 ZNF738Q8NE65 137 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 TRAV30A0A087WSZ9 112 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
AP4E1-202ENST00000558439 LINC00614P0C842 121 aa12.42□□□□□ -0.42
AP4E1-202ENST00000558439 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
AP4E1-202ENST00000558439 NUDT3O95989 172 aa12.42□□□□□ -0.42
AP4E1-202ENST00000558439 Q0VG73 95 aa12.42□□□□□ -0.42
AP4E1-202ENST00000558439 C18orf32Q8TCD1 76 aa12.42□□□□□ -0.42
AP4E1-202ENST00000558439 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
AP4E1-202ENST00000558439 ARHGAP32A7KAX9 2087 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 FXYD7P58549 80 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 DMRTC2Q8IXT2 367 aaPredicted RBP12.41□□□□□ -0.42
AP4E1-202ENST00000558439 OR10AG1Q8NH19 301 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 A0A1B0GWJ7 208 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 USP34Q70CQ2 3546 aa12.41□□□□□ -0.42
AP4E1-202ENST00000558439 CGB3P0DN86 165 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 CGB7P0DN87 165 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
AP4E1-202ENST00000558439 LY6EQ16553 131 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 NPIPB5A8MRT5 1133 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 THBDP07204 575 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 FAM181BA6NEQ2 426 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 BMI1P35226 326 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 DSCAMO60469 2012 aa12.4□□□□□ -0.42
AP4E1-202ENST00000558439 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.43
AP4E1-202ENST00000558439 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.43
AP4E1-202ENST00000558439 PATE2Q6UY27 113 aa12.4□□□□□ -0.43
AP4E1-202ENST00000558439 TNFRSF14Q92956 283 aa12.4□□□□□ -0.43
AP4E1-202ENST00000558439 TRAV9-2A0A087WT02 112 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 CLEC19AQ6UXS0 136 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 PRELID3AQ96N28 172 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 CBY1Q9Y3M2 126 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 SELENOKQ9Y6D0 94 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 CEACAM4O75871 244 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 ZNF124Q15973 351 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 TMEM78Q5T7P6 136 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 Q8TAT8 98 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 TPTE2P1Q5T6R2 138 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 CHD8Q9HCK8 2581 aa12.39□□□□□ -0.43
AP4E1-202ENST00000558439 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 KLRB1Q12918 225 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 SPTBN4Q9H254 2564 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 PSG9Q00887 426 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 CR1LQ2VPA4 569 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 PRSS33Q8NF86 280 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 TDGF1P3P51864 188 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 TMEM116Q8NCL8 245 aa12.38□□□□□ -0.43
AP4E1-202ENST00000558439 PDLIM4P50479 330 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 KHDC1LQ5JSQ8 128 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 ZNF503Q96F45 646 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 IGLC7A0M8Q6 106 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 F5H697 171 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 LY6DQ14210 128 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 PRSS46E5RG02 174 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 MAJINQ3KP22 176 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 PVRIGQ6DKI7 326 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 RAB37Q96AX2 223 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 UCNP55089 124 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 SAPCD1Q5SSQ6 148 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 FAM167A-AS1Q96KT0 104 aa12.37□□□□□ -0.43
AP4E1-202ENST00000558439 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 TOMM40O96008 361 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 PF4V1P10720 104 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 DLX6P56179 175 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 METTL26Q96S19 204 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 KLK15Q9H2R5 256 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 SOX21Q9Y651 276 aaPredicted RBP12.36□□□□□ -0.43
AP4E1-202ENST00000558439 C22orf46C9J442 243 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 ARMS2P0C7Q2 107 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 ZFP30Q9Y2G7 519 aa12.36□□□□□ -0.43
AP4E1-202ENST00000558439 MGPP08493 103 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 Q8N7P7 452 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 NCR2O95944 276 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms