RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NUDT15Q9NV35 164 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 MGAT4CQ9UBM8 478 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 HIGD1AQ9Y241 93 aa8.58□□□□□ -1.04
HERC1-202ENST00000558324 A0A0J9YX75 114 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 TSC22D2O75157 780 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 HYPMO75409 117 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 MBPP02686 304 aaPredicted RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 TCRBP04435 133 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 S100A7P31151 101 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PRR20EP86478 221 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PRR20CP86479 221 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PRR20DP86480 221 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PRR20BP86481 221 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PRR20AP86496 221 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 PSG9Q00887 426 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 ZNF846Q147U1 533 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 ZNF705AQ6ZN79 300 aaPredicted RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 GPR82Q96P67 336 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 SHANK2-AS3Q9BTD1 123 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 APLNQ9ULZ1 77 aa8.57□□□□□ -1.04
HERC1-202ENST00000558324 LSM5Q9Y4Y9 91 aaKnown RBP8.57□□□□□ -1.04
HERC1-202ENST00000558324 IGHV4-4A0A075B6R2 117 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 DEFB131BA0A096LNP1 70 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 TRAV8-2A0A0B4J237 113 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 C7orf66A4D0T2 115 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 C5orf51A6NDU8 294 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 L7N2F9 121 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
HERC1-202ENST00000558324 TCTAP57738 103 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 SELENOTP62341 195 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 VAMP2P63027 116 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 ARL16Q0P5N6 197 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 CNPY1Q3B7I2 92 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 SPATA31B1PQ5VZV4 182 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 TEPPQ6URK8 271 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 CLUHP3Q96NS8 147 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 ARL6Q9H0F7 186 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 NPVFQ9HCQ7 196 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 GOLT1BQ9Y3E0 138 aa8.56□□□□□ -1.04
HERC1-202ENST00000558324 GOSR2O14653 212 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 RPL7P18124 248 aaKnown RBP8.55□□□□□ -1.04
HERC1-202ENST00000558324 BCAP31P51572 246 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 CNN1P51911 297 aaKnown RBP8.55□□□□□ -1.04
HERC1-202ENST00000558324 TAS2R30P59541 319 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
HERC1-202ENST00000558324 NEU1Q99519 415 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 RFNGQ9Y644 331 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 KMT2AQ03164 3969 aa8.55□□□□□ -1.04
HERC1-202ENST00000558324 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 FNDC10F2Z333 226 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 K7EPK0 472 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 M0R2Z0 102 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 HBE1P02100 147 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 SNRPCP09234 159 aaKnown RBP8.54□□□□□ -1.04
HERC1-202ENST00000558324 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 SPART-AS1P0CW21 52 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 CAV2P51636 162 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 PLP1P60201 277 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 S100A10P60903 97 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 SPINK13Q1W4C9 94 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 ZNF546Q86UE3 836 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 C12orf45Q8N5I9 185 aaPredicted RBP8.54□□□□□ -1.04
HERC1-202ENST00000558324 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 TMEM208Q9BTX3 173 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 ARV1Q9H2C2 271 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
HERC1-202ENST00000558324 LOC102723971A0A1B0GUV8 181 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 FAM240BA0A1B0GVZ2 78 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 TMEM189A5PLL7 270 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 AGPAT2O15120 278 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 CST7O76096 145 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 DUSP14O95147 198 aaKnown RBP8.53□□□□□ -1.04
HERC1-202ENST00000558324 AMBPP02760 352 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 FAM222AQ5U5X8 452 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 PATE2Q6UY27 113 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 OR11H7Q8NGC8 314 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 MGST2Q99735 147 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 RNF126Q9BV68 326 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
HERC1-202ENST00000558324 FAM24AA6NFZ4 105 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 H3BTX0 84 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 COX7A2P2O60397 106 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 HTN3P15516 51 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
HERC1-202ENST00000558324 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 LINC00305Q7Z4B0 112 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 BAP18Q8IXM2 172 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 C2orf50Q96LR7 162 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
HERC1-202ENST00000558324 GGACTQ9BVM4 153 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms