RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 LGALSLQ3ZCW2 172 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-204ENST00000558172 FFAR4Q5NUL3 377 aa7.87□□□□□ -1.15
LRRC28-204ENST00000558172 OR2G3Q8NGZ4 309 aa7.87□□□□□ -1.15
LRRC28-204ENST00000558172 UHRF2Q96PU4 802 aa7.87□□□□□ -1.15
LRRC28-204ENST00000558172 SLC25A22Q9H936 323 aa7.87□□□□□ -1.15
LRRC28-204ENST00000558172 DNASE2O00115 360 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-204ENST00000558172 MEOX2P50222 304 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 CD300CQ08708 224 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 FAM78BQ5VT40 261 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 SAMD13Q5VXD3 122 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 GTSCR1Q86UQ5 136 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 BPIFA4PQ86YQ2 179 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 SCRT1Q9BWW7 348 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-204ENST00000558172 MRPL32Q9BYC8 188 aaKnown RBP7.86□□□□□ -1.15
LRRC28-204ENST00000558172 MS4A6AQ9H2W1 248 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 NRN1Q9NPD7 142 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 SELENOKQ9Y6D0 94 aa7.86□□□□□ -1.15
LRRC28-204ENST00000558172 IGKV3-7A0A075B6H7 116 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 M6PRP20645 277 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 RHOBP62745 196 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 GBGT1Q8N5D6 347 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 STXBP6Q8NFX7 210 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 PRR25Q96S07 402 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 SLC25A32Q9H2D1 315 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 SEPSECSQ9HD40 501 aaKnown RBP7.85□□□□□ -1.15
LRRC28-204ENST00000558172 FUT9Q9Y231 359 aa7.85□□□□□ -1.15
LRRC28-204ENST00000558172 A0A1W2PPV4 95 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 K7EQG2 157 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 SEC11BP0C7V7 166 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 TPT1P13693 172 aaKnown RBP7.84□□□□□ -1.15
LRRC28-204ENST00000558172 ATF4P18848 351 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-204ENST00000558172 TFPI2P48307 235 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 CD81P60033 236 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 LEMD1Q68G75 181 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 WFDC3Q8IUB2 231 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 BAP18Q8IXM2 172 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 OR10G4Q8NGN3 311 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 OR10G9Q8NGN4 311 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 OR10G7Q8NGN6 311 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 FAM110AQ9BQ89 295 aa7.84□□□□□ -1.15
LRRC28-204ENST00000558172 AURKAIP1Q9NWT8 199 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-204ENST00000558172 A0A087X0K7 114 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 MRPS12O15235 138 aaKnown RBP7.83□□□□□ -1.16
LRRC28-204ENST00000558172 SPP1P10451 314 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 ID1P41134 155 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 TAS2R45P59539 299 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 GUK1Q16774 197 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 EIF5AL1Q6IS14 154 aaKnown RBP7.83□□□□□ -1.16
LRRC28-204ENST00000558172 SLC51BQ86UW2 128 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 Q8N1Y9 231 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 STOML3Q8TAV4 291 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 DCANP1Q8TF63 244 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 SH3BGRL3Q9H299 93 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 RFNGQ9Y644 331 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 SMAD5-AS1Q9Y6J3 95 aa7.83□□□□□ -1.16
LRRC28-204ENST00000558172 TRAV5A0A0B4J249 113 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 ISLRO14498 428 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 CD7P09564 240 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 RAB2AP61019 212 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
LRRC28-204ENST00000558172 DEFA6Q01524 100 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 AKR1C8PQ5T2L2 129 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 MORN5Q5VZ52 161 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 MIR17HGQ75NE6 70 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 LRRC20Q8TCA0 184 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-204ENST00000558172 OR51M1Q9H341 326 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 CLEC5AQ9NY25 188 aa7.82□□□□□ -1.16
LRRC28-204ENST00000558172 UMAD1C9J7I0 102 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 HIST1H1EP10412 219 aaKnown RBP7.81□□□□□ -1.16
LRRC28-204ENST00000558172 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-204ENST00000558172 PSMB3P49720 205 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 KHDC3LQ587J8 217 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 LCN15Q6UWW0 184 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 PQLC2Q6ZP29 291 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 RPP25LQ8N5L8 163 aaKnown RBP7.81□□□□□ -1.16
LRRC28-204ENST00000558172 FAM167A-AS1Q96KT0 104 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 SLC50A1Q9BRV3 221 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 PAXXQ9BUH6 204 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 SLC25A2Q9BXI2 301 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 HRH4Q9H3N8 390 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 RPRMQ9NS64 109 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 C19orf73Q9NVV2 129 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 AGRNO00468 2067 aa7.81□□□□□ -1.16
LRRC28-204ENST00000558172 A8MZ25 164 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 K7EIL1 84 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 SOCS3O14543 225 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 ZNF253O75346 499 aa7.8□□□□□ -1.16
LRRC28-204ENST00000558172 PRB2P02812 416 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms