RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 RAB19A4D1S5 217 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 HMGB3O15347 200 aaKnown RBP8.09□□□□□ -1.11
PRKCH-227ENST00000557599 TRBV12-3P01733 135 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 CD28P10747 220 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-227ENST00000557599 GALR1P47211 349 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 PEA15Q15121 130 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 USF2Q15853 346 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-227ENST00000557599 ZNF726P1Q15940 193 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 SPATA31B1PQ5VZV4 182 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 NDUFA11Q86Y39 141 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 C1QL4Q86Z23 238 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 C11orf44Q8N8P7 122 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 OR1N2Q8NGR9 330 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 UHRF2Q96PU4 802 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
PRKCH-227ENST00000557599 OR51M1Q9H341 326 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 DAZ1Q9NQZ3 744 aaKnown RBP8.09□□□□□ -1.11
PRKCH-227ENST00000557599 GNG13Q9P2W3 67 aa8.09□□□□□ -1.11
PRKCH-227ENST00000557599 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 A0A087WW49 117 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 ZNF98A6NK75 572 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 I3L521 148 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 K7EMT4 169 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 GCHFRP30047 84 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-227ENST00000557599 MEOX2P50222 304 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 PATE2Q6UY27 113 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 REC114Q7Z4M0 266 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 OR11H1Q8NG94 326 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 LYPD6BQ8NI32 183 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 CITED2Q99967 270 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-227ENST00000557599 TXNDC17Q9BRA2 123 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 SCRT1Q9BWW7 348 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 ZFAND3Q9H8U3 227 aa8.08□□□□□ -1.12
PRKCH-227ENST00000557599 IGHV3OR16-8A0A075B7F1 116 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 G3V4G9 280 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 CCL24O00175 119 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 LGALS9O00182 355 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 HIST1H1EP10412 219 aaKnown RBP8.07□□□□□ -1.12
PRKCH-227ENST00000557599 CRYBB3P26998 211 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 NSUN5P1Q3KNT7 163 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 TOR2AQ5JU69 321 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 SLC25A2Q9BXI2 301 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 NKX6-2Q9C056 277 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-227ENST00000557599 TREM1Q9NP99 234 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 TMEM14CQ9P0S9 112 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 ARL2-SNX15V9GYD0 113 aa8.07□□□□□ -1.12
PRKCH-227ENST00000557599 TRAV5A0A0B4J249 113 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 HELTA6NFD8 242 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 RBFOX3A6NFN3 312 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 ZNF785A8K8V0 405 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 ZNF207O43670 478 aaKnown RBP8.06□□□□□ -1.12
PRKCH-227ENST00000557599 PF4P02776 101 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 CD5P06127 495 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 BCL2P10415 239 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 MYCNOSP40205 109 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 SYNJ2BPP57105 145 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 PMS2P11Q13670 270 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 GUK1Q16774 197 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 HAGHQ16775 308 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 CST9LP1Q5W188 147 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 SUN5Q8TC36 379 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 FAM210AQ96ND0 272 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 SMDT1Q9H4I9 107 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 VAX2Q9UIW0 290 aa8.06□□□□□ -1.12
PRKCH-227ENST00000557599 IGHV7-4-1A0A0J9YVY3 117 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 A8MWP6 167 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 F6UZH7 168 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 OR10J4P0C629 311 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 NBEAP1P0C6P0 100 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 DEFB136Q30KP8 78 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 SAMD13Q5VXD3 122 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 LEMD1Q68G75 181 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 HIST2H2BDQ6DRA6 164 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 UNQ9165/PRO28630Q6UXU0 137 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 DYNLRB2Q8TF09 96 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 FAM167A-AS1Q96KT0 104 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 AAMDCQ9H7C9 122 aa8.05□□□□□ -1.12
PRKCH-227ENST00000557599 LOC102723971A0A1B0GUV8 181 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 BUB3O43684 328 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 PAGE4O60829 102 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCH-227ENST00000557599 PYYP10082 97 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 GP9P14770 177 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 SLURP1P55000 103 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 UBE2G2P60604 165 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 RPL11P62913 178 aaKnown RBP8.04□□□□□ -1.12
PRKCH-227ENST00000557599 PSG9Q00887 426 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 KLF5Q13887 457 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-227ENST00000557599 PDE6HQ13956 83 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 ZNF506Q5JVG8 444 aa8.04□□□□□ -1.12
PRKCH-227ENST00000557599 SIGLEC15Q6ZMC9 328 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms