RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 OR11H4Q8NGC9 324 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 PFDN5Q99471 154 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 FAM110AQ9BQ89 295 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 KCNIP2Q9NS61 270 aa11.04□□□□□ -0.64
VIPAS39-210ENST00000557466 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 GALR1P47211 349 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 ZNF124Q15973 351 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 S100A7AQ86SG5 101 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 APRG1Q8IVJ8 170 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 C17orf77Q96MU5 243 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 GPR82Q96P67 336 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 B9D2Q9BPU9 175 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 TUBA4BQ9H853 241 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 RFNGQ9Y644 331 aa11.03□□□□□ -0.64
VIPAS39-210ENST00000557466 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 RBMY1BA6NDE4 496 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 RBMY1EA6NEQ0 496 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 SOCS3O14543 225 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 RBMY1DP0C7P1 496 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 RPL7P18124 248 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 DEFB131AP59861 70 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 ZNF266Q14584 549 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 GATAD1Q8WUU5 269 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
VIPAS39-210ENST00000557466 TRAV5A0A0B4J249 113 aa11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 FFAR4Q5NUL3 377 aa11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 LINC00322Q6ZN03 302 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 TCTE3Q8IZS6 198 aa11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 HSD17B11Q8NBQ5 300 aa11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 ASCL2Q99929 193 aa11.01□□□□□ -0.65
VIPAS39-210ENST00000557466 HMSDA8MTL9 139 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
VIPAS39-210ENST00000557466 PSMG4Q5JS54 123 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 SPATA31B1PQ5VZV4 182 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 RPL7L1Q6DKI1 246 aaKnown RBP11□□□□□ -0.65
VIPAS39-210ENST00000557466 SBSPONQ8IVN8 264 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 RNF24Q9Y225 148 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 TIMM9Q9Y5J7 89 aa11□□□□□ -0.65
VIPAS39-210ENST00000557466 A0A087X0K7 114 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 ATP6V0CP27449 155 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 PSMB3P49720 205 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 MEOX2P50222 304 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 ZNF345Q14585 488 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 MIR17HGQ75NE6 70 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 KCNRGQ8N5I3 272 aa10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 SEPSECSQ9HD40 501 aaKnown RBP10.99□□□□□ -0.65
VIPAS39-210ENST00000557466 BORCS7-ASMTA0A0B4J1R7 106 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 SNRPCP09234 159 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 CXCL2P19875 107 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 SNRPD3P62318 126 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 BPIFA4PQ86YQ2 179 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 PSMG3Q9BT73 122 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 CYTL1Q9NRR1 136 aa10.98□□□□□ -0.65
VIPAS39-210ENST00000557466 AGRNO00468 2067 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 TRAV8-2A0A0B4J237 113 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 KNCNA6PVL3 124 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 ISLRO14498 428 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 TAAR5O14804 337 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 RPL35AP18077 110 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 ID1P41134 155 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 RAB2AP61019 212 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 CD300CQ08708 224 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 HAGHQ16775 308 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 SAMD13Q5VXD3 122 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 SLC25A2Q9BXI2 301 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 FUT9Q9Y231 359 aa10.97□□□□□ -0.65
VIPAS39-210ENST00000557466 H3BQ15 152 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 H3BTX0 84 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 DEFB1P60022 68 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 ACOT6Q3I5F7 207 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 OR2G3Q8NGZ4 309 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 LINC00052Q96N35 136 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 ARPC5LQ9BPX5 153 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.65
VIPAS39-210ENST00000557466 A0A0D9SG52 128 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 SLC17A3O00476 420 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 EIF3GO75821 320 aaKnown RBP eCLIP10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 C1QBP02746 253 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 PYYP10082 97 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 M6PRP20645 277 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 ACTL10Q5JWF8 245 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 LCN15Q6UWW0 184 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms