RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 OR4X1Q8NH49 305 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 CT45A3Q8NHU0 189 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 TMED6Q8WW62 240 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 ZNRF4Q8WWF5 429 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 MBD3L1Q8WWY6 194 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 PIGCQ92535 297 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 SMIM19Q96E16 107 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 SGK494Q96LW2 274 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 SLC25A21Q9BQT8 299 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-247ENST00000557311 SLC25A33Q9BSK2 321 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 REEP1Q9H902 201 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 TMEM242Q9NWH2 141 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 FAM206AQ9NX38 181 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-247ENST00000557311 LSM2Q9Y333 95 aaKnown RBP3.8□□□□□ -1.8
ATXN3-247ENST00000557311 HILPDAQ9Y5L2 63 aa3.8□□□□□ -1.8
ATXN3-247ENST00000557311 OR2T8A6NH00 312 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 A8MZ25 164 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 K7EN84 100 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 K7EP34 96 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 SIRPB1O00241 398 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 HYPMO75409 117 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 OR7C1O76099 320 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 NDUFB6O95139 128 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 RBP4P02753 201 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 H1F0P07305 194 aaKnown RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 SPINK8P0C7L1 97 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 IGHV1-8P0DP01 117 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 EVI2AP22794 236 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 HTR1DP28221 377 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 RND2P52198 227 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 H2BFSP57053 126 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 FAM3BP58499 235 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 PNRC1Q12796 327 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 FHL3Q13643 280 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 CXorf66Q5JRM2 361 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 UBE2NLQ5JXB2 153 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 UFSP1Q6NVU6 142 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 Q6ZRG5 221 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 Q6ZVH6 145 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 FAM57BQ71RH2 274 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 TMEM179BQ7Z7N9 219 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 DEFB125Q8N687 156 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 C8orf31Q8N9H6 132 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ADAD2Q8NCV1 583 aaKnown RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 KLHL30-AS1Q8NEE0 82 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 OR5AK2Q8NH90 309 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 CMTM2Q8TAZ6 248 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 SMIM4Q8WVI0 70 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 FCAMRQ8WWV6 532 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ADTRPQ96IZ2 230 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 NIPSNAP3BQ9BS92 247 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 SAMD10Q9BYL1 202 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 KCNK15Q9H427 330 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 MAP1LC3AQ9H492 121 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 NPVFQ9HCQ7 196 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 GPR84Q9NQS5 396 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
ATXN3-247ENST00000557311 RPL36Q9Y3U8 105 aaKnown RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
ATXN3-247ENST00000557311 TINCRA0A1B0GVN0 87 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 C7orf71A4D174 169 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 MEIS3P1A6NDR6 274 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 SH2D7A6NKC9 451 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 PRYO14603 147 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 NBR2O15453 112 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 MOSP00540 346 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 EIF4EP06730 217 aaKnown RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-247ENST00000557311 CD24P25063 80 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 PYCR1P32322 319 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 CTRLP40313 264 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 LPAR6P43657 344 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 INSL3P51460 131 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 FUT6P51993 359 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 FXYD6P3P58550 94 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 SLC35B1P78383 322 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 PMCHL1Q16048 86 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 FAM90A2PQ658T7 463 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 DPPA3Q6W0C5 159 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 ACP7Q6ZNF0 438 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 FOXI2Q6ZQN5 318 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 PRSS45Q7RTY3 260 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 SAXO1Q8IYX7 474 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 OR10V1Q8NGI7 309 aa3.78□□□□□ -1.8
ATXN3-247ENST00000557311 OR51A4Q8NGJ6 313 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms