RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 OR2K2Q8NGT1 345 aa7.38□□□□□ -1.23
TMEM260-213ENST00000556929 TMED6Q8WW62 240 aa7.38□□□□□ -1.23
TMEM260-213ENST00000556929 ACTR3CQ9C0K3 210 aaPredicted RBP7.38□□□□□ -1.23
TMEM260-213ENST00000556929 SLC25A22Q9H936 323 aa7.38□□□□□ -1.23
TMEM260-213ENST00000556929 FUT9Q9Y231 359 aa7.38□□□□□ -1.23
TMEM260-213ENST00000556929 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
TMEM260-213ENST00000556929 CDC34P49427 236 aaPredicted RBP7.37□□□□□ -1.23
TMEM260-213ENST00000556929 RAB5CP51148 216 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 DPPA3Q6W0C5 159 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
TMEM260-213ENST00000556929 TCF24Q7RTU0 167 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 SCRT1Q9BWW7 348 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 SEPSECSQ9HD40 501 aaKnown RBP7.37□□□□□ -1.23
TMEM260-213ENST00000556929 RPRMQ9NS64 109 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 MLXQ9UH92 298 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 WNK1Q9H4A3 2382 aa7.37□□□□□ -1.23
TMEM260-213ENST00000556929 ANK2Q01484 3957 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 TRAV25A0A0B4J276 109 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 IGLV1-51P01701 117 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 IGLL1P15814 213 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 GALR1P47211 349 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 SULT1A2P50226 295 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
TMEM260-213ENST00000556929 PAFAH1B2P68402 229 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 DEFB114Q30KQ6 69 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 KHDC3LQ587J8 217 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 LEMD1Q68G75 181 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 SIGLEC15Q6ZMC9 328 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 RPP25LQ8N5L8 163 aaKnown RBP7.36□□□□□ -1.23
TMEM260-213ENST00000556929 RNF141Q8WVD5 230 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
TMEM260-213ENST00000556929 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 OR7C2O60412 319 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 STAG3L2P0CL84 134 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 STAG3L3P0CL85 134 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
TMEM260-213ENST00000556929 MEOX2P50222 304 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 MORN5Q5VZ52 161 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 LCN12Q6JVE5 192 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 ALKAL2Q6UX46 152 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 LRRC20Q8TCA0 184 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 RAB24Q969Q5 203 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 OR51M1Q9H341 326 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
TMEM260-213ENST00000556929 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
TMEM260-213ENST00000556929 STAB1Q9NY15 2570 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
TMEM260-213ENST00000556929 TSPAN4O14817 238 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 IFNA7P01567 189 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
TMEM260-213ENST00000556929 FAM90A2PQ658T7 463 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 PQLC2Q6ZP29 291 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 FAM213BQ8TBF2 198 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 PAXXQ9BUH6 204 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 SELENOKQ9Y6D0 94 aa7.34□□□□□ -1.23
TMEM260-213ENST00000556929 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 A0A087X0K7 114 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 MAP1LC3B2A6NCE7 125 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 OR4C46A6NHA9 309 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
TMEM260-213ENST00000556929 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
TMEM260-213ENST00000556929 CXorf1O96002 111 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
TMEM260-213ENST00000556929 BLOC1S1P78537 153 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 GUK1Q16774 197 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 SAMD13Q5VXD3 122 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 LCN15Q6UWW0 184 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
TMEM260-213ENST00000556929 MAP1LC3BQ9GZQ8 125 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
TMEM260-213ENST00000556929 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
TMEM260-213ENST00000556929 HBE1P02100 147 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 NBEAP1P0C6P0 100 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 PYYP10082 97 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 GP9P14770 177 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 ID1P41134 155 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 FHITP49789 147 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 UBE2L3P68036 154 aaKnown RBP7.32□□□□□ -1.24
TMEM260-213ENST00000556929 ZNF726P1Q15940 193 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 FAM74A1Q5RGS3 127 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 SSX7Q7RTT5 188 aa7.32□□□□□ -1.24
TMEM260-213ENST00000556929 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms