RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 RD3LP0DJH9 198 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 RND2P52198 227 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 S100A10P60903 97 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 SPCS3P61009 180 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 RAP2BP61225 183 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 FCN2Q15485 313 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 TMEM88Q6PEY1 159 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 NMES1Q9C002 83 aa8.97□□□□□ -0.97
SHMT2-223ENST00000556689 L7N2F9 121 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 CCNKO75909 580 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 HBE1P02100 147 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 VAMP2P63027 116 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 RPP30P78346 268 aaKnown RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 ETFRF1Q6IPR1 90 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 ZBTB8BQ8NAP8 495 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 OR4B1Q8NGF8 309 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 OR52E5Q8NH55 327 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 RNASEH2CQ8TDP1 164 aaKnown RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 NPIPB3Q92617 1050 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 CLUHP3Q96NS8 147 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 CIB3Q96Q77 187 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 ATG101Q9BSB4 218 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 SAV1Q9H4B6 383 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 HEYLQ9NQ87 328 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-223ENST00000556689 GOLT1BQ9Y3E0 138 aa8.96□□□□□ -0.98
SHMT2-223ENST00000556689 A0A0G2JRQ6 117 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 CEBPZOSA8MTT3 80 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 TOMM40O96008 361 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-223ENST00000556689 ID1P41134 155 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 DEFB1P60022 68 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 DAD1P61803 113 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 FOXI2Q6ZQN5 318 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 ZNF709Q8N972 641 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 OR11H7Q8NGC8 314 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 GPR146Q96CH1 333 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 PFDN2Q9UHV9 154 aa8.95□□□□□ -0.98
SHMT2-223ENST00000556689 YTHDF2Q9Y5A9 579 aaKnown RBP8.95□□□□□ -0.98
SHMT2-223ENST00000556689 PSG1P11464 419 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 PSG9Q00887 426 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 RRN3P1Q2M238 152 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 LRRC37A5PQ49AS3 106 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 AARDQ4LEZ3 155 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 Q8N1X5 172 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 C6orf223Q8N319 242 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 OR51G1Q8NGK1 321 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
SHMT2-223ENST00000556689 LSM5Q9Y4Y9 91 aaKnown RBP8.94□□□□□ -0.98
SHMT2-223ENST00000556689 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 SSSCA1O60232 199 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 NXPH3O95157 252 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 SIX6O95475 246 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 CXCL3P19876 107 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 H2BFSP57053 126 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 EBLN2Q6P2I7 272 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 SLC24A4Q8NFF2 622 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 OR2T35Q8NGX2 323 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 ACY3Q96HD9 319 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 SCRT2Q9NQ03 307 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 HSPB7Q9UBY9 170 aa8.93□□□□□ -0.98
SHMT2-223ENST00000556689 A0A1B0GVG6 124 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 SYNGR2O43760 224 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 PSMB3P49720 205 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 STX12Q86Y82 276 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 OR4D5Q8NGN0 318 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 PPP1R1CQ8WVI7 109 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 RNF125Q96EQ8 232 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 PBDC1Q9BVG4 233 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 MAGT1Q9H0U3 335 aa8.92□□□□□ -0.98
SHMT2-223ENST00000556689 E5RGE8 158 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 ZFP69Q49AA0 526 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 C1orf194Q5T5A4 169 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 OR8G2PQ6IF36 304 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 TCTE3Q8IZS6 198 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 INO80EQ8NBZ0 244 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-223ENST00000556689 TMEM170AQ8WVE7 144 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 TMEM208Q9BTX3 173 aa8.91□□□□□ -0.98
SHMT2-223ENST00000556689 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 FXYD6-FXYD2A0A087WZ82 144 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 F6UB75 175 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 K7EPK0 472 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 SOCS3O14543 225 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 PITX3O75364 302 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 MBPP02686 304 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-223ENST00000556689 CAV2P51636 162 aa8.9□□□□□ -0.98
SHMT2-223ENST00000556689 PAX9P55771 341 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms