RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 RABAC1Q9UI14 185 aa10.63□□□□□ -0.71
EFCAB11-212ENST00000556639 PGPEP1LA6NFU8 196 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 TMEM250H0YL14 139 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 TAGLN2P37802 199 aaKnown RBP10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 FAM74A3Q4VXF1 159 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 TMEM88Q6PEY1 159 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 SMIM7Q9BQ49 75 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 GAR1Q9NY12 217 aaKnown RBP10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 FN1P02751 2386 aaKnown RBP10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 SCGB2A1O75556 95 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 SNAPINO95295 136 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 SELENOKQ9Y6D0 94 aa10.62□□□□□ -0.71
EFCAB11-212ENST00000556639 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 A0A1W2PRE2 83 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 PDE6DO43924 150 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 GNG5P63218 68 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 TRBV20OR9-2A0A075B6H5 130 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 SLC17A3O00476 420 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 EDN2P20800 178 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 SLC35B1P78383 322 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 CBLN2Q8IUK8 224 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 KLHDC1Q8N7A1 406 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 NIPSNAP3BQ9BS92 247 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 TMEM14CQ9P0S9 112 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 CDC42EP3Q9UKI2 254 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
EFCAB11-212ENST00000556639 C7orf77A4D0Y5 90 aa10.6□□□□□ -0.71
EFCAB11-212ENST00000556639 IGLC2P0DOY2 106 aa10.6□□□□□ -0.71
EFCAB11-212ENST00000556639 MYCNOSP40205 109 aa10.6□□□□□ -0.71
EFCAB11-212ENST00000556639 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
EFCAB11-212ENST00000556639 BPIFA4PQ86YQ2 179 aa10.6□□□□□ -0.71
EFCAB11-212ENST00000556639 PGPA6NDG6 321 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 HIST1H1EP10412 219 aaKnown RBP10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 FOXE3Q13461 319 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 RPS10P5Q9NQ39 176 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 PEF1Q9UBV8 284 aaKnown RBP10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 ZNF320A2RRD8 509 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 F6UZH7 168 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 DNASE2O00115 360 aaPredicted RBP10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 BUB3O43684 328 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 ELANEP08246 267 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 MYOZ3Q8TDC0 251 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 ATP6V0BQ99437 205 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 Q9H3A6 140 aa10.59□□□□□ -0.71
EFCAB11-212ENST00000556639 TMEM89A2RUT3 159 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 CLDN34H7C241 214 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 RNASE1P07998 156 aaKnown RBP10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 HILS1P60008 231 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 TXNDC17Q9BRA2 123 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 TRBV19A0A075B6N1 114 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 TMEM241Q24JQ0 296 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 OR4F17Q8NGA8 305 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
EFCAB11-212ENST00000556639 F8P00451 2351 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 GGCTO75223 188 aaKnown RBP10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 RPL35P42766 123 aaKnown RBP10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 RPL23P62829 140 aaKnown RBP10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 ADIRFQ15847 76 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 NDUFA4O00483 81 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 SLC25A5P05141 298 aaKnown RBP10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 CRYBA1P05813 215 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 RNF152Q8N8N0 203 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 METTL26Q96S19 204 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 NAT8Q9UHE5 227 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 U3KQE9 123 aa10.57□□□□□ -0.72
EFCAB11-212ENST00000556639 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 A0A087WW49 117 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 SIGLEC15Q6ZMC9 328 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 M0R3E3 92 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 ISOC2Q96AB3 205 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
EFCAB11-212ENST00000556639 HELTA6NFD8 242 aa10.55□□□□□ -0.72
EFCAB11-212ENST00000556639 HAX1O00165 279 aa10.55□□□□□ -0.72
EFCAB11-212ENST00000556639 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms