RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ZNF134P52741 427 aa13.94□□□□□ -0.18
PTPN21-208ENST00000556564 SPATA45Q537H7 98 aa13.94□□□□□ -0.18
PTPN21-208ENST00000556564 CIRBPQ14011 172 aaKnown RBP13.94□□□□□ -0.18
PTPN21-208ENST00000556564 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
PTPN21-208ENST00000556564 ATOH7Q8N100 152 aa13.94□□□□□ -0.18
PTPN21-208ENST00000556564 TMEM131Q92545 1883 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 IGHV4-38-2P0DP08 117 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 CACNG7P62955 275 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 TMEM249Q2WGJ8 235 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 CA1P00915 261 aaPredicted RBP13.93□□□□□ -0.18
PTPN21-208ENST00000556564 FOLR2P14207 255 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 ERCC8Q13216 396 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 CRPP02741 224 aa13.93□□□□□ -0.18
PTPN21-208ENST00000556564 INSP01308 110 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 ORMDL3Q8N138 153 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 USF3Q68DE3 2245 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 OCC1Q8TAD7 63 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 ZNF138P52744 262 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
PTPN21-208ENST00000556564 TCF23Q7RTU1 214 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 C11orf53Q8IXP5 236 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 RNF182Q8N6D2 247 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 C1orf147Q96MC9 270 aaPredicted RBP13.91□□□□□ -0.18
PTPN21-208ENST00000556564 CACNA1HO95180 2353 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 STAG3L2P0CL84 134 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 STAG3L3P0CL85 134 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 PRADC1Q9BSG0 188 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 NCOR1P1Q9H4R4 102 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
PTPN21-208ENST00000556564 A0A1B0GW15 77 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 VGLL1Q99990 258 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 PRR31Q5SQ13 230 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 LINC00311Q8N616 119 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 NDUFA4L2Q9NRX3 87 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 ZGRF1Q86YA3 2104 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 GFI1BQ5VTD9 330 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 HIST1H4GQ99525 98 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 CHCHD5Q9BSY4 110 aa13.91□□□□□ -0.18
PTPN21-208ENST00000556564 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 A6NDN8 102 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 OR13C6PQ8NH95 151 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 FOXC2Q99958 501 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 ZNF25P17030 456 aaPredicted RBP13.9□□□□□ -0.18
PTPN21-208ENST00000556564 J3QR89 54 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 CFAP161Q6P656 301 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 DTX2Q86UW9 622 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 DOCK7Q96N67 2140 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 MRAP2Q96G30 205 aa13.9□□□□□ -0.18
PTPN21-208ENST00000556564 PTPRSQ13332 1948 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 IGLV3-1P01715 115 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 C10orf105Q8TEF2 133 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 DAZAP2Q15038 168 aaPredicted RBP13.89□□□□□ -0.19
PTPN21-208ENST00000556564 ZNF414Q96IQ9 312 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 LINC00477Q96M19 166 aa13.89□□□□□ -0.19
PTPN21-208ENST00000556564 A0A087X0M5 115 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 A0A1B0GX30 115 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 NDUFA3O95167 84 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 TCRAP04437 139 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 DEFB130BP0DP73 79 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 DEFB130AP0DP74 79 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 TMEM95Q3KNT9 176 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 XCL2Q9UBD3 114 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 SH2D1AO60880 128 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 TCTEX1D4Q5JR98 221 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 NUDT10Q8NFP7 164 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 NUDT11Q96G61 164 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 AGMATQ9BSE5 352 aa13.88□□□□□ -0.19
PTPN21-208ENST00000556564 PSG3Q16557 428 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 JKAMPQ9P055 326 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 CFPP27918 469 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 SHANK2-AS3Q9BTD1 123 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 GTF2H5Q6ZYL4 71 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 H3BRM9 83 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 C19orf84I3L1E1 186 aa13.87□□□□□ -0.19
PTPN21-208ENST00000556564 TRAV8-1A0A0A6YYK1 113 aa13.86□□□□□ -0.19
PTPN21-208ENST00000556564 RPP25LQ8N5L8 163 aaKnown RBP13.86□□□□□ -0.19
PTPN21-208ENST00000556564 FGF23Q9GZV9 251 aaPredicted RBP13.86□□□□□ -0.19
PTPN21-208ENST00000556564 CFHR3Q02985 330 aa13.86□□□□□ -0.19
PTPN21-208ENST00000556564 DERL1Q9BUN8 251 aa13.86□□□□□ -0.19
PTPN21-208ENST00000556564 NRN1Q9NPD7 142 aa13.86□□□□□ -0.19
PTPN21-208ENST00000556564 F2Z2F3 143 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 LHBP01229 141 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 PMCHL1Q16048 86 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 LIME1Q9H400 295 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 OSTCQ9NRP0 149 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 PKDREJQ9NTG1 2253 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 ZNF843Q8N446 348 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 TRAV8-6A0A0B4J262 113 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 TMEM238LA0A1B0GVL6 79 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 A6NJY4 79 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 IFI27P40305 119 aaPredicted RBP13.85□□□□□ -0.19
PTPN21-208ENST00000556564 MRAPQ8TCY5 172 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 CARHSP1Q9Y2V2 147 aaKnown RBP13.85□□□□□ -0.19
PTPN21-208ENST00000556564 CENPVL3A0A0U1RRI6 287 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms