RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RAB2AP61019 212 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 KHDC3LQ587J8 217 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 BPIFA4PQ86YQ2 179 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 LRRC20Q8TCA0 184 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 TMED6Q8WW62 240 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 FAM167A-AS1Q96KT0 104 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 SCRT1Q9BWW7 348 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 ACTR3CQ9C0K3 210 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-212ENST00000556541 DOK5Q9P104 306 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 MLXQ9UH92 298 aa8.51□□□□□ -1.05
FOXN3-212ENST00000556541 IGHV3OR16-8A0A075B7F1 116 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 TRAV1-1A0A0B4J248 108 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 A0A1W2PPV4 95 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 ZNF253O75346 499 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 SAP30O75446 220 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-212ENST00000556541 STAG3L2P0CL84 134 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 STAG3L3P0CL85 134 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 GALR1P47211 349 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 PDE6HQ13956 83 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 GUK1Q16774 197 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 GCSAMLQ5JQS6 135 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 LCN12Q6JVE5 192 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 SIGLEC15Q6ZMC9 328 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 OR8I2Q8N0Y5 310 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 SUN5Q8TC36 379 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 MBD3L1Q8WWY6 194 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 UHRF2Q96PU4 802 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 SPAG8Q99932 426 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-212ENST00000556541 FAM110AQ9BQ89 295 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
FOXN3-212ENST00000556541 ZNF207O43670 478 aaKnown RBP8.49□□□□□ -1.05
FOXN3-212ENST00000556541 IGLC2P0DOY2 106 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 GP9P14770 177 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 TEX261Q6UWH6 196 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 RAB24Q969Q5 203 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 SAT2Q96F10 170 aaPredicted RBP8.49□□□□□ -1.05
FOXN3-212ENST00000556541 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 HRH4Q9H3N8 390 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
FOXN3-212ENST00000556541 CXorf1O96002 111 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 IFNA7P01567 189 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 HIST1H1EP10412 219 aaKnown RBP8.48□□□□□ -1.05
FOXN3-212ENST00000556541 PAFAH1B2P68402 229 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 PMS2P11Q13670 270 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 CD300EQ496F6 205 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-212ENST00000556541 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 FAM122CQ6P4D5 195 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 MIR17HGQ75NE6 70 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 TCF24Q7RTU0 167 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 NRN1Q9NPD7 142 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 ARL2-SNX15V9GYD0 113 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 SORL1Q92673 2214 aa8.48□□□□□ -1.05
FOXN3-212ENST00000556541 EDN2P20800 178 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
FOXN3-212ENST00000556541 BLOC1S1P78537 153 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 ZNF726P1Q15940 193 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 BEAN1Q3B7T3 259 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 KPRPQ5T749 579 aaPredicted RBP8.47□□□□□ -1.05
FOXN3-212ENST00000556541 SAMD5Q5TGI4 173 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 SPATA31B1PQ5VZV4 182 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 RBPMS2Q6ZRY4 209 aaKnown RBP8.47□□□□□ -1.05
FOXN3-212ENST00000556541 TMEM61Q8N0U2 210 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 LYPD1Q8N2G4 141 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 ARL6IP6Q8N6S5 226 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 ZNF680Q8NEM1 530 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 DCANP1Q8TF63 244 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 SLC50A1Q9BRV3 221 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 OR51M1Q9H341 326 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 SMAD5-AS1Q9Y6J3 95 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 NOTCH3Q9UM47 2321 aa8.47□□□□□ -1.05
FOXN3-212ENST00000556541 IGHV3-49A0A0A0MS15 119 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 OR4C46A6NHA9 309 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 TEX46H3BTG2 121 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 K7EQG2 157 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ISLRO14498 428 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 SOCS3O14543 225 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 HBE1P02100 147 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 IGLL1P15814 213 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ATF4P18848 351 aaPredicted RBP8.46□□□□□ -1.06
FOXN3-212ENST00000556541 PSMB3P49720 205 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 PPT1P50897 306 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF767PQ75MW2 155 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 LYPD6BQ8NI32 183 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 FXYD5Q96DB9 178 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF503Q96F45 646 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 C17orf77Q96MU5 243 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 PAXXQ9BUH6 204 aa8.46□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF256Q9Y2P7 627 aaPredicted RBP8.46□□□□□ -1.06
FOXN3-212ENST00000556541 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms