RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 TOMM20LQ6UXN7 152 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 OR5H6Q8NGV6 325 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 FCAMRQ8WWV6 532 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 FRZBQ92765 325 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 FAM3DQ96BQ1 224 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 S100A16Q96FQ6 103 aaKnown RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 ABHD1Q96SE0 405 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
ATXN3-239ENST00000556315 AK6Q9Y3D8 172 aaKnown RBP3.39□□□□□ -1.87
ATXN3-239ENST00000556315 IGKV1D-8A0A087WSZ0 117 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 ANKRD20A5PA0PJZ0 165 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 IFITM5A6NNB3 132 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 MFNGO00587 321 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 HTN3P15516 51 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 HIST1H1DP16402 221 aaKnown RBP3.38□□□□□ -1.87
ATXN3-239ENST00000556315 NPPCP23582 126 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 DTYMKP23919 212 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 CLDN12P56749 244 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 ARL6IP1Q15041 203 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 MSMO1Q15800 293 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 Q5VSD8 79 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 LPCAT3Q6P1A2 487 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 C16orf54Q6UWD8 224 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 GSG1LQ6UXU4 331 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF705AQ6ZN79 300 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-239ENST00000556315 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
ATXN3-239ENST00000556315 DMBX1Q8NFW5 382 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 STXBP6Q8NFX7 210 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 OR1P1Q8NH06 330 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 ZNRF2Q8NHG8 242 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 LSM10Q969L4 123 aaKnown RBP3.38□□□□□ -1.87
ATXN3-239ENST00000556315 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 NUDT15Q9NV35 164 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATXN3-239ENST00000556315 RFNGQ9Y644 331 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 V9GY05 133 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
ATXN3-239ENST00000556315 METTL21EPA6NDL7 271 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF705FA8MVS1 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-239ENST00000556315 I3L2K1 104 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 TNFSF12O43508 249 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 SSNA1O43805 119 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 GNG7O60262 68 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 B3GALNT1O75752 331 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 SCGNO76038 276 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 NDUFB6O95139 128 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF705DP0CH99 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF705BP0CI00 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-239ENST00000556315 GNRHRP30968 328 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 NPBWR1P48145 328 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 CCL18P55774 89 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 XGP55808 180 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 FGL1Q08830 312 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 CATR1Q13166 79 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-239ENST00000556315 FAM222AQ5U5X8 452 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 ZNF600Q6ZNG1 722 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 NFE4Q86UQ8 179 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 DCANP1Q8TF63 244 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 MOB3AQ96BX8 217 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM56Q96MV1 263 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 SLC25A21Q9BQT8 299 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-239ENST00000556315 C20orf85Q9H1P6 137 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 Q9H8V8 135 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 FKBP11Q9NYL4 201 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 FAT1Q14517 4588 aa3.37□□□□□ -1.87
ATXN3-239ENST00000556315 AGRNO00468 2067 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 HELTA6NFD8 242 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 H3BMM0 161 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 L7N2F9 121 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 TMEM50AO95807 157 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 MT-CO2P00403 227 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 TBPP20226 339 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 CRYBB3P26998 211 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 S100A11P31949 105 aa3.36□□□□□ -1.87
ATXN3-239ENST00000556315 P2RY1P47900 373 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms