RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ORM2P19652 201 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 GATA2P23769 480 aaPredicted RBP13.35□□□□□ -0.27
CDKN3-209ENST00000556102 DAD1P61803 113 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 RNF212Q495C1 297 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 SPANXN5Q5MJ07 72 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 Q6ZR54 194 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 TMEM208Q9BTX3 173 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 TMEM147Q9BVK8 224 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 V9GYH0 126 aa13.35□□□□□ -0.27
CDKN3-209ENST00000556102 HOXB5P09067 269 aa13.34□□□□□ -0.27
CDKN3-209ENST00000556102 MED14OSP0DP75 135 aa13.34□□□□□ -0.27
CDKN3-209ENST00000556102 TMEM182Q6ZP80 229 aaPredicted RBP13.34□□□□□ -0.27
CDKN3-209ENST00000556102 ACOT7LQ6ZUV0 252 aa13.34□□□□□ -0.27
CDKN3-209ENST00000556102 STRAPQ9Y3F4 350 aaKnown RBP13.34□□□□□ -0.27
CDKN3-209ENST00000556102 MUC4Q99102 2169 aa13.34□□□□□ -0.27
CDKN3-209ENST00000556102 H3BP45 60 aa13.33□□□□□ -0.28
CDKN3-209ENST00000556102 DUSP14O95147 198 aaKnown RBP13.33□□□□□ -0.28
CDKN3-209ENST00000556102 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
CDKN3-209ENST00000556102 TMEM88Q6PEY1 159 aa13.33□□□□□ -0.28
CDKN3-209ENST00000556102 OR11H7Q8NGC8 314 aa13.33□□□□□ -0.28
CDKN3-209ENST00000556102 INSP01308 110 aa13.32□□□□□ -0.28
CDKN3-209ENST00000556102 TMEM144Q7Z5S9 345 aa13.32□□□□□ -0.28
CDKN3-209ENST00000556102 TRAV8-2A0A0B4J237 113 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 H3BRN7 92 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 M0R2Z0 102 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
CDKN3-209ENST00000556102 UBE2MP61081 183 aaKnown RBP13.31□□□□□ -0.28
CDKN3-209ENST00000556102 B2MP61769 119 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 IGFL4Q6B9Z1 124 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 C15orf53Q8NAA6 179 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 RYR1P21817 5038 aa13.31□□□□□ -0.28
CDKN3-209ENST00000556102 LYRM9A8MSI8 78 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 IL5P05113 134 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 S100A5P33763 92 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 RAP2BP61225 183 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 ID3Q02535 119 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 FGL1Q08830 312 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 SHANK2-AS3Q9BTD1 123 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 SLC25A39Q9BZJ4 359 aaPredicted RBP13.3□□□□□ -0.28
CDKN3-209ENST00000556102 HIGD1AQ9Y241 93 aa13.3□□□□□ -0.28
CDKN3-209ENST00000556102 SMCO3A2RU48 225 aa13.29□□□□□ -0.28
CDKN3-209ENST00000556102 ZNF705GA8MUZ8 300 aaPredicted RBP13.29□□□□□ -0.28
CDKN3-209ENST00000556102 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
CDKN3-209ENST00000556102 TSPOP30536 169 aa13.29□□□□□ -0.28
CDKN3-209ENST00000556102 POLR2GP62487 172 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDKN3-209ENST00000556102 ZNF738Q8NE65 137 aa13.29□□□□□ -0.28
CDKN3-209ENST00000556102 HYPMO75409 117 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 ADAP1O75689 374 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 FAM3BP58499 235 aaPredicted RBP13.28□□□□□ -0.28
CDKN3-209ENST00000556102 PLP1P60201 277 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 CCDC190Q86UF4 302 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 PSENENQ9NZ42 101 aa13.28□□□□□ -0.28
CDKN3-209ENST00000556102 C9orf170A2RU37 121 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 BOLA2-SMG1P6H3BVE0 249 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 PRM2P04554 102 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 LINC00869P0C866 280 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 SELENOTP62341 195 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 C1orf134Q5TEV5 83 aa13.27□□□□□ -0.29
CDKN3-209ENST00000556102 A0A087X0K7 114 aa13.26□□□□□ -0.29
CDKN3-209ENST00000556102 PMS2P5A8MQ11 134 aa13.26□□□□□ -0.29
CDKN3-209ENST00000556102 OR5G3P0C626 314 aa13.26□□□□□ -0.29
CDKN3-209ENST00000556102 S100A7AQ86SG5 101 aa13.26□□□□□ -0.29
CDKN3-209ENST00000556102 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
CDKN3-209ENST00000556102 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 SSSCA1O60232 199 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 DEFB130BP0DP73 79 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 DEFB130AP0DP74 79 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 CXCL3P19876 107 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 DLK1P80370 383 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 HIST1H1AQ02539 215 aaPredicted RBP13.25□□□□□ -0.29
CDKN3-209ENST00000556102 TMEM256Q8N2U0 113 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 SMIM8Q96KF7 97 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 ATG101Q9BSB4 218 aa13.25□□□□□ -0.29
CDKN3-209ENST00000556102 PLAC8L1A1L4L8 177 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 FNDC10F2Z333 226 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 CCNKO75909 580 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 NDUFB6O95139 128 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 AZU1P20160 251 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 RRAS2P62070 204 aaPredicted RBP13.24□□□□□ -0.29
CDKN3-209ENST00000556102 RHOBP62745 196 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 PSG3Q16557 428 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
CDKN3-209ENST00000556102 NAP1L6A6NFF2 107 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 CCDC160A6NGH7 325 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 K7EPK0 472 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 LRRC20Q8TCA0 184 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 LINC01587Q99440 93 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 ARL6Q9H0F7 186 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
CDKN3-209ENST00000556102 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms