RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-219	ENST00000555906	YTHDF2	Q9Y5A9	579 aa	Known RBP	14.04	□□□□□ -0.16
PRKCH-219	ENST00000555906	ORM2	P19652	201 aa		14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	GATA2	P23769	480 aa	Predicted RBP	14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	LGALS9B	Q3B8N2	356 aa		14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	TMEM182	Q6ZP80	229 aa	Predicted RBP	14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	TMEM144	Q7Z5S9	345 aa		14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	NACA	E9PAV3	2078 aa		14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906	PCLO	Q9Y6V0	5065 aa		14.03	□□□□□ -0.16
PRKCH-219	ENST00000555906		H3BRN7	92 aa		14.02	□□□□□ -0.17
PRKCH-219	ENST00000555906	UBE2DNL	Q8IWF7	75 aa		14.02	□□□□□ -0.17
PRKCH-219	ENST00000555906	RTL8C	O15255	209 aa		14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	DUSP14	O95147	198 aa	Known RBP	14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	CNN1	P51911	297 aa	Known RBP	14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	ID3	Q02535	119 aa		14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	CYP2G1P	Q6ZSU1	146 aa		14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	TMEM208	Q9BTX3	173 aa		14.01	□□□□□ -0.17
PRKCH-219	ENST00000555906	C9orf170	A2RU37	121 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	ADAP1	O75689	374 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	INS	P01308	110 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	IFNA21	P01568	189 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	OR11H7	Q8NGC8	314 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	SHANK2-AS3	Q9BTD1	123 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	14	□□□□□ -0.17
PRKCH-219	ENST00000555906	SRR	Q9GZT4	340 aa		14	□□□□□ -0.17
PRKCH-219	ENST00000555906	TRAV8-2	A0A0B4J237	113 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	SMCO3	A2RU48	225 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	CCDC160	A6NGH7	325 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	PRSS29P	A6NIE9	313 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906		M0R2N4	97 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	NDUFB6	O95139	128 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	HTN3	P15516	51 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	RPL7	P18124	248 aa	Known RBP	13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	PLP1	P60201	277 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	RAP2B	P61225	183 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	DAD1	P61803	113 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	POLR2G	P62487	172 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	SPANXN2	Q5MJ10	180 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	PSENEN	Q9NZ42	101 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	HIGD1A	Q9Y241	93 aa		13.99	□□□□□ -0.17
PRKCH-219	ENST00000555906	NAP1L6	A6NFF2	107 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	PMS2P5	A8MQ11	134 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906		M0R2Z0	102 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	CRX	O43186	299 aa	Predicted RBP	13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	SSSCA1	O60232	199 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	IL5	P05113	134 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	LINC00869	P0C866	280 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	SELENOT	P62341	195 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	SPINK13	Q1W4C9	94 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	RNF212	Q495C1	297 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	RNF182	Q8N6D2	247 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	RBM38	Q9H0Z9	239 aa	Known RBP	13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906	PLA2G2E	Q9NZK7	142 aa		13.98	□□□□□ -0.17
PRKCH-219	ENST00000555906		A0A087X0K7	114 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	HYPM	O75409	117 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	B2M	P61769	119 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	DLK1	P80370	383 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	TMEM88	Q6PEY1	159 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906		Q6ZR54	194 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	ZNF738	Q8NE65	137 aa		13.97	□□□□□ -0.17
PRKCH-219	ENST00000555906	LYRM9	A8MSI8	78 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	FNDC10	F2Z333	226 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	BOLA2-SMG1P6	H3BVE0	249 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906		K7EPK0	472 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	TSPO	P30536	169 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	INPP1	P49441	399 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	FGL1	Q08830	312 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	TRIQK	Q629K1	86 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	IGFL4	Q6B9Z1	124 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	TMEM14EP	Q6UXP3	125 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	S100A7A	Q86SG5	101 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	BAP18	Q8IXM2	172 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	SMIM8	Q96KF7	97 aa		13.96	□□□□□ -0.17
PRKCH-219	ENST00000555906	IGLV2-18	A0A075B6J9	118 aa		13.95	□□□□□ -0.18
PRKCH-219	ENST00000555906	OR4E1	P0C645	316 aa		13.95	□□□□□ -0.18
PRKCH-219	ENST00000555906	C15orf53	Q8NAA6	179 aa		13.95	□□□□□ -0.18
PRKCH-219	ENST00000555906	UHRF2	Q96PU4	802 aa		13.95	□□□□□ -0.18
PRKCH-219	ENST00000555906	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	ZNF701	M0R085	212 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	CCNK	O75909	580 aa		13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	OR5G3	P0C626	314 aa		13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	RRAS2	P62070	204 aa	Predicted RBP	13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	BAK1	Q16611	211 aa		13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	FLVCR2	Q9UPI3	526 aa		13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	RNF24	Q9Y225	148 aa		13.94	□□□□□ -0.18
PRKCH-219	ENST00000555906	TSC22D2	O75157	780 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	METTL15P1	P0C7V9	234 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	MED14OS	P0DP75	135 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	CXCL3	P19876	107 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	FAM3B	P58499	235 aa	Predicted RBP	13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	TMEM256	Q8N2U0	113 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	OR8A1	Q8NGG7	326 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	NPVF	Q9HCQ7	196 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	MGAT4C	Q9UBM8	478 aa		13.93	□□□□□ -0.18
PRKCH-219	ENST00000555906	PLAC8L1	A1L4L8	177 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	CXCL2	P19875	107 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	BTC	P35070	178 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	TAS2R30	P59541	319 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	HIST1H1A	Q02539	215 aa	Predicted RBP	13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	SLC38A11	Q08AI6	406 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	C4orf46	Q504U0	113 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms